EST details — SGN-E269429
| Search information |
| Request: 269429 | Match: SGN-E269429 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C63757 | Clone name: cLEM-2-M5 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C180792 is on microarray TOM1: SGN-S1-1-3.1.17.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180792 [TUS-35-E14] | Trace: SGN-T193615 | EST: SGN-E392289 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180792 [TUS-35-E14] | Trace: SGN-T193616 | EST: SGN-E392290 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E269429 | Length: 557 bp (932 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E269429 [] (trimmed)
GGAGAAAATGAATTTTAATCCTGAAAGTGACATGTGGAAATGGCGTGACAGTTACTCTCTTGGAGATGATCCCGATATTGATATATCTGATTGCT
TGTTGAGCAAAGGTGAAGATATTTCCTTTATGTTTGACGATGAAAGAACTCCAGTTAAGTCTTGTGGAGAGTTGACTTACCATGGTAGCAGCTAC
GAAAACAATGACAAGGAGACCCAGAGATACAATGAGTCATCCTCACAAGTGAAAAGGCGCAGAATGCTTCAGTTTGATACAGAAGCAGCAGATGC
ACCACTTAGCAACGAGGAACTATCATCATCATTTCTAAATTCACAGGAGACTGACACTTCTGTTGATGAATTCATCTCTGAAATGTCACAGTGGG
TTTCAGTATTTTCAGAGGACATATCTTCATCTGGTAATGAGGGGCTCGATCAGTCATCTGAAGGATGGGTTGCTAGTTGTTTAAACGATTCTCAG
ATGCATGTCAGCCTTGAGGATATCGCTGCCTCTGATATTCAGCTCGATGTTTCAGAGATTTGCAACACCCCACGTGAATGTG
TGTTGAGCAAAGGTGAAGATATTTCCTTTATGTTTGACGATGAAAGAACTCCAGTTAAGTCTTGTGGAGAGTTGACTTACCATGGTAGCAGCTAC
GAAAACAATGACAAGGAGACCCAGAGATACAATGAGTCATCCTCACAAGTGAAAAGGCGCAGAATGCTTCAGTTTGATACAGAAGCAGCAGATGC
ACCACTTAGCAACGAGGAACTATCATCATCATTTCTAAATTCACAGGAGACTGACACTTCTGTTGATGAATTCATCTCTGAAATGTCACAGTGGG
TTTCAGTATTTTCAGAGGACATATCTTCATCTGGTAATGAGGGGCTCGATCAGTCATCTGAAGGATGGGTTGCTAGTTGTTTAAACGATTCTCAG
ATGCATGTCAGCCTTGAGGATATCGCTGCCTCTGATATTCAGCTCGATGTTTCAGAGATTTGCAACACCCCACGTGAATGTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E269429] | SGN-U577083 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T83894 [Download][View] | Facility Assigned ID: TGFAE75TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0054 | Quality Trim Threshold: 14.5 |
Working
