EST details — SGN-E270308
| Search information |
| Request: 270308 | Match: SGN-E270308 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C62063 | Clone name: cLEM-1-F4 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177748 is on microarray TOM1: SGN-S1-1-7.2.6.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177748 [TUS-27-F18] | Trace: SGN-T193016 | EST: SGN-E391690 | Direction: 5' | Facility: INRA |
| Clone: SGN-C177748 [TUS-27-F18] | Trace: SGN-T193265 | EST: SGN-E391939 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270308 | Length: 518 bp (886 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270308 [] (trimmed)
TTTTTTTCTTCACGCAATACATATGAACTGAAGAAAAAAATAAGAGAAAAAAAAAATCAATGGCGGCATCGAAGAGCTATTTCGCTAGATCGAAC
TACCGGTTTCTATCAAGTGACCGGAATGTTTCAGTAACTTCCGATACGATGTTCGAGCTGGATGAATCCGATGTATGGAACTCACCGGCGACGGC
AAGGTCATCGTCGCCGGAGTTTCGGAAAACGAATACGAGGATTTCTAGAAAGCAGTCGATTGCGAAAAGTGATCGAAACAGTACTGGAGTAACGG
TAAAATCAGCAGCAGCGGTTGCGGCGGCGTCTTCTATGCCGGTGAACGTGCCGGACTGGTCGAAGATACTGAAGGATGAGTATAGAGAGAATCGG
AGAAGAGATAGCGATGATGACGGAGAAGACGATGATGATGCTGAGAATCGGATTCCGCCGCATGAGTTTTTAGCGAGGCAGTTTGCGAGAACGAG
AATCGCTTCCTTCTCTGTTCACGAAGGAGTTGGAAGGACTCTC
TACCGGTTTCTATCAAGTGACCGGAATGTTTCAGTAACTTCCGATACGATGTTCGAGCTGGATGAATCCGATGTATGGAACTCACCGGCGACGGC
AAGGTCATCGTCGCCGGAGTTTCGGAAAACGAATACGAGGATTTCTAGAAAGCAGTCGATTGCGAAAAGTGATCGAAACAGTACTGGAGTAACGG
TAAAATCAGCAGCAGCGGTTGCGGCGGCGTCTTCTATGCCGGTGAACGTGCCGGACTGGTCGAAGATACTGAAGGATGAGTATAGAGAGAATCGG
AGAAGAGATAGCGATGATGACGGAGAAGACGATGATGATGCTGAGAATCGGATTCCGCCGCATGAGTTTTTAGCGAGGCAGTTTGCGAGAACGAG
AATCGCTTCCTTCTCTGTTCACGAAGGAGTTGGAAGGACTCTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270308] | SGN-U576214 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T83681 [Download][View] | Facility Assigned ID: TGFAD26TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.949 | Expected Error Rate: 0.0028 | Quality Trim Threshold: 14.5 |
Working
