EST details — SGN-E270337
| Search information |
| Request: 270337 | Match: SGN-E270337 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C62112 | Clone name: cLEM-1-I11 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177767 is on microarray TOM1: SGN-S1-1-4.3.6.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177767 [TUS-27-G13] | Trace: SGN-T182863 | EST: SGN-E371355 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177767 [TUS-27-G13] | Trace: SGN-T182864 | EST: SGN-E371356 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270337 | Length: 528 bp (1243 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270337 [] (trimmed)
CATCTTAGCTGCTTTCATTCAAAGTCTGAACTCAAAGCTGAAGTCCTTTGTGGAATCAAGGAGATTGGTAGCATATTGTACTGGATGGGACTTCT
TGATATTGTATTGAGAGAAGTCGATACCCGCCAGTTTATGCAAACTGCTCCTTGGTTGGGATTGATTCCTGGTGCTGATGGGCAAATATTGCACT
CTCAAGAAGGAGGAGATAGCCCTATGGTCACTCTGTTTAAATCTGCAACTACTGCAACCATGTCCAACCCTAACTGCACAAATCCAACATCATTT
CACACAATATCGAGACAAGCAGAAGCTGCCGATTTGTTGTACAAAGCCAATATTAATACTGGAAGTGTGTTGGAATATGCCCTTGCTTTTACAAG
TGCTGCATTAGATAAATACTGCAGTAAATGGAGTGCAGCCCCAAAGACGGGTTTTATTGATATTACTACTTCAAAGGACTTCTACCGGATTTTCA
GTGGACTTCAAATCGAATACCTGGAGGAATCTATTCAGCTACAATCAAACACT
TGATATTGTATTGAGAGAAGTCGATACCCGCCAGTTTATGCAAACTGCTCCTTGGTTGGGATTGATTCCTGGTGCTGATGGGCAAATATTGCACT
CTCAAGAAGGAGGAGATAGCCCTATGGTCACTCTGTTTAAATCTGCAACTACTGCAACCATGTCCAACCCTAACTGCACAAATCCAACATCATTT
CACACAATATCGAGACAAGCAGAAGCTGCCGATTTGTTGTACAAAGCCAATATTAATACTGGAAGTGTGTTGGAATATGCCCTTGCTTTTACAAG
TGCTGCATTAGATAAATACTGCAGTAAATGGAGTGCAGCCCCAAAGACGGGTTTTATTGATATTACTACTTCAAAGGACTTCTACCGGATTTTCA
GTGGACTTCAAATCGAATACCTGGAGGAATCTATTCAGCTACAATCAAACACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270337] | SGN-U576073 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T83710 [Download][View] | Facility Assigned ID: TGFAA54TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0073 | Quality Trim Threshold: 20.5 |
Working
