EST details — SGN-E270392
| Search information |
| Request: 270392 | Match: SGN-E270392 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C62090 | Clone name: cLEM-1-H10 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177758 is on microarray TOM1: SGN-S1-1-5.3.6.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177758 [TUS-27-G4] | Trace: SGN-T183011 | EST: SGN-E370636 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177758 [TUS-27-G4] | Trace: SGN-T183012 | EST: SGN-E370637 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270392 | Length: 469 bp (877 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270392 [] (trimmed)
GGTTGAAAATAGGCTTGTTGGAATGAAGAGCCGTGGAGTATATGAAACCCCTGGGGGAACTATCCTTTTCTCAGCTGTGCAAGAACTTGAGTCTC
TTACACTGGATCGTGAAACAATCCAAGTCAAGGATTCTCTCGCCCTCAAATATGCAGAATTAGTTTATGCTGGCAGGTGGTTTGATCCACTTAGC
GAGTCAATGGATGCTTTCATGGAGAATATTACCAAAACTACAACAGGTTCAGTTACTCTCAAACTATACAAAGGATCAGTTTCATTGACAGGTCG
TCAAAGTCCTCACAGTTTGTACAGACAAGATATCTCATCATTCGAGAGTGGGGATATCTACAATCAAGCCGATGCTGCACGATTCATTCGTCTGT
ATGGGCTTCCAATGAGGGTTAGGGCAATGCTTGAGAACGGTCTGTAAAATCGTTTTCGCGTCGTGAATTGATGGTTTAACGTTGACAGT
TTACACTGGATCGTGAAACAATCCAAGTCAAGGATTCTCTCGCCCTCAAATATGCAGAATTAGTTTATGCTGGCAGGTGGTTTGATCCACTTAGC
GAGTCAATGGATGCTTTCATGGAGAATATTACCAAAACTACAACAGGTTCAGTTACTCTCAAACTATACAAAGGATCAGTTTCATTGACAGGTCG
TCAAAGTCCTCACAGTTTGTACAGACAAGATATCTCATCATTCGAGAGTGGGGATATCTACAATCAAGCCGATGCTGCACGATTCATTCGTCTGT
ATGGGCTTCCAATGAGGGTTAGGGCAATGCTTGAGAACGGTCTGTAAAATCGTTTTCGCGTCGTGAATTGATGGTTTAACGTTGACAGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270392] | SGN-U571375 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T83765 [Download][View] | Facility Assigned ID: TGFAD41TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0223 | Quality Trim Threshold: 14.5 |
Working
