EST details — SGN-E270421
| Search information |
| Request: 270421 | Match: SGN-E270421 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C62158 | Clone name: cLEM-1-K21 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177781 is on microarray TOM1: SGN-S1-1-6.4.6.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177781 [TUS-27-H3] | Trace: SGN-T183075 | EST: SGN-E370838 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177781 [TUS-27-H3] | Trace: SGN-T183076 | EST: SGN-E370839 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270421 | Length: 526 bp (1246 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270421 [] (trimmed)
GGCAGCAGTGTATATTCAATTACCTGCGTTGTGATCCTGAGGATCACTATTTTCTCTTGACTGAAAGCCCTATGACTGCACCAGAGAACAGAGAA
TATACTGGTGAAATTATGTTTGAGACTTTCAATGTTCCGGGACTTTATATAGCTGTCCAGCCGGTTCTTGCTTTGGCAGCTGGCTACACAGCATC
CAAGTGTGAGATGACTGGAGTTGTAGTGGATATTGGAGATGGTGCTACCCATGTTGTGCCTGTTGCTGAGGGTTATGTTATTGGGAGCAGCATTA
AGTCAATTCCTGTTTCTGGGAAAGATGTCACCCTCTTCGTTCAACAACTTATGAAGGAAAGGGGAGAACATGTTCCCGCAGAAGATTCCTTTGAA
ATAGCACGAAAAGTGAAGGAAATGCATTGCTACACTTGTTCTGACATTGTGAAGGAGTTCAATAAGCATGATAAAGAGCCAGGAAAGTACATCAA
GCACTGGAGAGGTACAAAACCAAAGACAGGAGCACCTTATTCATGTGATGT
TATACTGGTGAAATTATGTTTGAGACTTTCAATGTTCCGGGACTTTATATAGCTGTCCAGCCGGTTCTTGCTTTGGCAGCTGGCTACACAGCATC
CAAGTGTGAGATGACTGGAGTTGTAGTGGATATTGGAGATGGTGCTACCCATGTTGTGCCTGTTGCTGAGGGTTATGTTATTGGGAGCAGCATTA
AGTCAATTCCTGTTTCTGGGAAAGATGTCACCCTCTTCGTTCAACAACTTATGAAGGAAAGGGGAGAACATGTTCCCGCAGAAGATTCCTTTGAA
ATAGCACGAAAAGTGAAGGAAATGCATTGCTACACTTGTTCTGACATTGTGAAGGAGTTCAATAAGCATGATAAAGAGCCAGGAAAGTACATCAA
GCACTGGAGAGGTACAAAACCAAAGACAGGAGCACCTTATTCATGTGATGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270421] | SGN-U573191 | Tomato 200607 | Build 2 | 29 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T83794 [Download][View] | Facility Assigned ID: TGFAA71TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0059 | Quality Trim Threshold: 20.5 |
Working
