EST details — SGN-E270892
| Search information |
| Request: 270892 | Match: SGN-E270892 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64583 | Clone name: cLEM-6-J1 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178121 is on microarray TOM1: SGN-S1-1-2.2.4.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178121 [TUS-28-F7] | Trace: SGN-T183480 | EST: SGN-E371120 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178121 [TUS-28-F7] | Trace: SGN-T183481 | EST: SGN-E371121 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270892 | Length: 521 bp (930 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270892 [] (trimmed)
GGTAATCATGGCTGCATCAGCCTCTTCTTTTGCTGCTAACAATTTTTTGCAGGCTATCAACTCCACCAGATCCATTGACAACAACAACAAGAAGA
CCCTTTTGGGAAATCAGCTTAAAGACAGCTCCTTTTTTCTTGGATCAGCTAAGAAACTCTATATGAAGAAACCCTTTTCGTCTCAGAACTCGAAA
AGCCGATCTAATGGTGTTTTCGCTGTTTCTGAGGTTGTTAAGAACAAGAAGCCCAATACAGACTCCTCACTCTCCAATCTGTTAATTACCAAAGA
TGAAAGGTTGGAGTTGTATGAAGATATGGTTCTTGGAAGAGCGTTTGAGGACATGTGTGCCCAAATGTATTACAGGGGAAAAATGTTTGGTTTTG
TGCATTTGTACAACGGCCAAGAAGCAGTCTCTACTGAGTTCATTAAGCTACTGAAGAAGGAGGATTCTGTGGTTAGCACTTATCGTGATCACGTC
CATGCATTGAGCAAAGGGGTTCCAGCACGTCAAGTGATGAGCGAGC
CCCTTTTGGGAAATCAGCTTAAAGACAGCTCCTTTTTTCTTGGATCAGCTAAGAAACTCTATATGAAGAAACCCTTTTCGTCTCAGAACTCGAAA
AGCCGATCTAATGGTGTTTTCGCTGTTTCTGAGGTTGTTAAGAACAAGAAGCCCAATACAGACTCCTCACTCTCCAATCTGTTAATTACCAAAGA
TGAAAGGTTGGAGTTGTATGAAGATATGGTTCTTGGAAGAGCGTTTGAGGACATGTGTGCCCAAATGTATTACAGGGGAAAAATGTTTGGTTTTG
TGCATTTGTACAACGGCCAAGAAGCAGTCTCTACTGAGTTCATTAAGCTACTGAAGAAGGAGGATTCTGTGGTTAGCACTTATCGTGATCACGTC
CATGCATTGAGCAAAGGGGTTCCAGCACGTCAAGTGATGAGCGAGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270892] | SGN-U571796 | Tomato 200607 | Build 2 | 84 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84648 [Download][View] | Facility Assigned ID: TGFAW49TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0162 | Quality Trim Threshold: 14.5 |
Working
