EST details — SGN-E270923
| Search information |
| Request: 270923 | Match: SGN-E270923 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64500 | Clone name: cLEM-6-F14 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178069 is on microarray TOM1: SGN-S1-1-6.4.4.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178069 [TUS-28-D3] | Trace: SGN-T183541 | EST: SGN-E371181 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178069 [TUS-28-D3] | Trace: SGN-T183542 | EST: SGN-E371182 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270923 | Length: 632 bp (889 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270923 [] (trimmed)
GATTAAAGTTTTTTTAATCAAATTCCTCCAAATTCACCAAAACCGGAACCCTTTTGGCCAAATTCAATCCCAAATTCACAAAAAATGTGGTTCCT
TTGTTCCCGAATTCAATTGTGTTGAAAACATTATCTGAATTGCTTCGTTTTTATCGCCGGGTCGGGTTATTTTGTGTATGAAAATGGCGGAGCGG
ATGAGGAGATACAGTGTTGGATACGCGTTAGCTCCGAAGAAACAAGCGAGTTTCATTCAACTTTCCCTTGTGAACCTTGCTAAAGAACGAGGAAT
TGATCTCATAAAGATCGATACGGAAAAGCGCTTGATTGATCAAGGACCGTTTGATTGTGTGCTACATAAAATGGACGGTGATGATTGGAAGCGTC
AGCTGAAAGAGTACGGATCTGAATTTCCTCAGGCGCTTATTATTGATTCCCCCGAAGCGATTGAGCGGTTGCATAACAGGATTTCGATGCTTCAG
GCGGTGGGGGAGGTTGAAATCGACTGTGAAAATGCTTCGTTTGGGATTCCGAAGCAAACTGTAATCTATGATGCAAAAATGGTGTCGGCTATAAA
CCTTGAAAATGAAGGTTTGGAATTCCCGGTGATTGCGAAACCATTGGTGGCTGATGGAAGTG
TTGTTCCCGAATTCAATTGTGTTGAAAACATTATCTGAATTGCTTCGTTTTTATCGCCGGGTCGGGTTATTTTGTGTATGAAAATGGCGGAGCGG
ATGAGGAGATACAGTGTTGGATACGCGTTAGCTCCGAAGAAACAAGCGAGTTTCATTCAACTTTCCCTTGTGAACCTTGCTAAAGAACGAGGAAT
TGATCTCATAAAGATCGATACGGAAAAGCGCTTGATTGATCAAGGACCGTTTGATTGTGTGCTACATAAAATGGACGGTGATGATTGGAAGCGTC
AGCTGAAAGAGTACGGATCTGAATTTCCTCAGGCGCTTATTATTGATTCCCCCGAAGCGATTGAGCGGTTGCATAACAGGATTTCGATGCTTCAG
GCGGTGGGGGAGGTTGAAATCGACTGTGAAAATGCTTCGTTTGGGATTCCGAAGCAAACTGTAATCTATGATGCAAAAATGGTGTCGGCTATAAA
CCTTGAAAATGAAGGTTTGGAATTCCCGGTGATTGCGAAACCATTGGTGGCTGATGGAAGTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270923] | SGN-U574811 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84679 [Download][View] | Facility Assigned ID: TGFAX31TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0066 | Quality Trim Threshold: 14.5 |
Working
