EST details — SGN-E271089
| Search information |
| Request: 271089 | Match: SGN-E271089 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C62679 | Clone name: cLEM-22-I17 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C180974 is on microarray TOM1: SGN-S1-1-5.1.17.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180974 [TUS-35-M4] | Trace: SGN-T193651 | EST: SGN-E392325 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180974 [TUS-35-M4] | Trace: SGN-T193652 | EST: SGN-E392326 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271089 | Length: 621 bp (955 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271089 [] (trimmed)
GTTTCGATCCTCGAAGATGAACCAAAACCCCAACCCTAATCCAGATCATCCTCATTCTTCCGATTACGCACCATACCCAAAGCTCAATCCAAACA
ACTTCGCTCCGGTATCTGAGACCTGGACTCCGGTTAATGTCGGATCGAATCCTCCATATGCGCCTATATATGGCAGCGCTGCAACTTCTATGCCT
ACTGAGTCTAATCCCTATGTTACTCCTGAGCCTGCTCAAACCCCTGCTTCATTAGTGAAGAATAAAATGGATTCTGTTAAGGATGCCCTTGGTAA
GTGGGGAAAGAAGGCTGCAGAGACAACAAAGAAGGCTGAAGATCTTGCTGGGAATATGTGGCAGCACTTTAAAACAAGCCCCAGTTTGGCTGATG
CGGCTATGGGAAGAATTGCTCATGGAACAATGGTCTTGGCAGAAGGTGGTTATGAAAAAGTCTTCAGACAAACATTTGAGACTGTCCCAGAGGAA
AAGCTTTTGAAGTCATATGCATGCTACTTATCTACTTCTGCTGGTCCGGTCATGGGAGTTCTGTACTTATCCACTGCAAAACTAGCATTTTGTAG
TGATAATCCTCTTTCATACAAAGTTGGTGATCTGACAGAATATAGCTACTA
ACTTCGCTCCGGTATCTGAGACCTGGACTCCGGTTAATGTCGGATCGAATCCTCCATATGCGCCTATATATGGCAGCGCTGCAACTTCTATGCCT
ACTGAGTCTAATCCCTATGTTACTCCTGAGCCTGCTCAAACCCCTGCTTCATTAGTGAAGAATAAAATGGATTCTGTTAAGGATGCCCTTGGTAA
GTGGGGAAAGAAGGCTGCAGAGACAACAAAGAAGGCTGAAGATCTTGCTGGGAATATGTGGCAGCACTTTAAAACAAGCCCCAGTTTGGCTGATG
CGGCTATGGGAAGAATTGCTCATGGAACAATGGTCTTGGCAGAAGGTGGTTATGAAAAAGTCTTCAGACAAACATTTGAGACTGTCCCAGAGGAA
AAGCTTTTGAAGTCATATGCATGCTACTTATCTACTTCTGCTGGTCCGGTCATGGGAGTTCTGTACTTATCCACTGCAAAACTAGCATTTTGTAG
TGATAATCCTCTTTCATACAAAGTTGGTGATCTGACAGAATATAGCTACTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271089] | SGN-U582842 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T86946 [Download][View] | Facility Assigned ID: TGFDG57TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0104 | Quality Trim Threshold: 14.5 |
Working
