EST details — SGN-E271188
| Search information |
| Request: 271188 | Match: SGN-E271188 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64228 | Clone name: cLEM-5-I15 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177906 is on microarray TOM1: SGN-S1-1-1.1.6.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177906 [TUS-27-M8] | Trace: SGN-T182966 | EST: SGN-E370591 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177906 [TUS-27-M8] | Trace: SGN-T182967 | EST: SGN-E370592 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271188 | Length: 528 bp (1026 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271188 [] (trimmed)
GGAGAAAATGAATTTTAATCCTGAAAGTGACATGTGGAAATGGCGTGACAGTTACTCTCTTGGAGATGATCCCGATATTGATATATCTGATTGCT
TGTTGAGCAAAGGTGAAGATATTTCCTTTATGTTTGACGATGAAAGAACTCCAGTTAAGTCTTGTGGAGAGTTGACTTACCATGGTAGCAGCTAC
GAAAACAATGACAAGGAGACCCAGAGATACAATGAGTCATCCTCACAAGTGAAAAGGCGCAGAATGCTTCAGTTTGATACAGAAGCAGCAGATGC
ACCACTTAGCAACGAGGAACTATCATCATCATTTCTAAATTCACAGGAGACTGACACTTCTGTTGATGAATTCATCTCTGAAATGTCACAGTGGG
TTTCAGTATTTTCAGAGGACATATCTTCATCTGGTAATGAGGGGCTCGATCAGTCATCTGAAGGATGGGTTGCTAGTTGTTTAAACGATTCTCAG
ATGCATGTCAACCTTGAGGATATCGCTGCCTCTGATATTCAGCTCGATGTTTC
TGTTGAGCAAAGGTGAAGATATTTCCTTTATGTTTGACGATGAAAGAACTCCAGTTAAGTCTTGTGGAGAGTTGACTTACCATGGTAGCAGCTAC
GAAAACAATGACAAGGAGACCCAGAGATACAATGAGTCATCCTCACAAGTGAAAAGGCGCAGAATGCTTCAGTTTGATACAGAAGCAGCAGATGC
ACCACTTAGCAACGAGGAACTATCATCATCATTTCTAAATTCACAGGAGACTGACACTTCTGTTGATGAATTCATCTCTGAAATGTCACAGTGGG
TTTCAGTATTTTCAGAGGACATATCTTCATCTGGTAATGAGGGGCTCGATCAGTCATCTGAAGGATGGGTTGCTAGTTGTTTAAACGATTCTCAG
ATGCATGTCAACCTTGAGGATATCGCTGCCTCTGATATTCAGCTCGATGTTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271188] | SGN-U577083 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84993 [Download][View] | Facility Assigned ID: TGFAQ56TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 14.5 |
Working
