EST details — SGN-E271199
| Search information |
| Request: 271199 | Match: SGN-E271199 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64313 | Clone name: cLEM-5-M17 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C180850 is on microarray TOM1: SGN-S1-1-1.3.17.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180850 [TUS-35-G24] | Trace: SGN-T193631 | EST: SGN-E392305 | Direction: 5' | Facility: INRA |
| Clone: SGN-C180850 [TUS-35-G24] | Trace: SGN-T193874 | EST: SGN-E392548 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271199 | Length: 484 bp (1016 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271199 [] (trimmed)
GGCAGCTTGTTGAAAAGTTCACAATTGAACGTGTAAACAAAAGTGGTGCCATATTTGATTCGACCAAGTTAAGGTGGATGAATGGTCAGCATTTG
AGATCACTTCCATCTGAAGAGTTGAACCAAATCATTGGTGAAAGGTGGAAGGATGCAGACATCGTTACAGAATCACAAGGAGTTTTTGTACAGGA
TGCTGTTCTACTCCTCAAAGATGGGATTGACTTGATACCAGATTCAGAGAAAGCACTTTCAAGTTTGCTATCTTATCCTTTATATGAAACTTTGA
CAAGCACGGAAGGAAAACTGATCTTAGAAGATGGAGTCTCTGAAGTTGCTAAGAGCTTGTTAGCAGCCTACGACAGTGGTGAGCTCTGTGGTGCA
CTTGCAGAAGGCCAACCTGGATGGAGAAACTGGGTGAAGAAGTTCGGTAAATTGCTGAAGCGCAAGGGAAAATCTCTCTTCATGCCCCTTTCGGT
GTTGCTAAC
AGATCACTTCCATCTGAAGAGTTGAACCAAATCATTGGTGAAAGGTGGAAGGATGCAGACATCGTTACAGAATCACAAGGAGTTTTTGTACAGGA
TGCTGTTCTACTCCTCAAAGATGGGATTGACTTGATACCAGATTCAGAGAAAGCACTTTCAAGTTTGCTATCTTATCCTTTATATGAAACTTTGA
CAAGCACGGAAGGAAAACTGATCTTAGAAGATGGAGTCTCTGAAGTTGCTAAGAGCTTGTTAGCAGCCTACGACAGTGGTGAGCTCTGTGGTGCA
CTTGCAGAAGGCCAACCTGGATGGAGAAACTGGGTGAAGAAGTTCGGTAAATTGCTGAAGCGCAAGGGAAAATCTCTCTTCATGCCCCTTTCGGT
GTTGCTAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271199] | SGN-U570864 | Tomato 200607 | Build 2 | 32 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85004 [Download][View] | Facility Assigned ID: TGFAQ81TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0051 | Quality Trim Threshold: 12.5 |
Working
