EST details — SGN-E271232

Search information 
Request: 271232Match: SGN-E271232
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C64243Clone name: cLEM-5-I8
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: Alias clone SGN-C177914 is on microarray TOM1: SGN-S1-1-1.1.6.14
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C177914 [TUS-27-M16] Trace: SGN-T182970 EST: SGN-E370595 Direction: 3' Facility: INRA
Clone: SGN-C177914 [TUS-27-M16] Trace: SGN-T182971 EST: SGN-E370596 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E271232Length: 470 bp (913 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E271232 [] (trimmed) GCTCTCTCTCTCTCCGATTCATCAATCTCAAGAAATAATTGTAATCCTCACATCATCATCATCAGGTTTTCTTCTTCAGACCTCAAATTGAATAG
TGATTCAATCGATTCGGTTCTAAATTTGATTCGATTTTAACTGAATCTGATGGAACCAATGGTCGTAGAGATGTCTTCAACGGTGATTTCGAATC
CTGTAACGTCTTCTGACAGAGTAATATCAAGGAGAAAAAAGAGTCAGAAAAGTTTGAGAAATCAAACTCAGAACAGTAGTAACAATAACAATAAC
AATAGTGAAACTCCGACTAATACTACTGAATGGAAAACTCAAGCTCAACAACAAGTTTACTCTTCAAAGCTACTCAAAGCACTCCGTGAAGTGCG
GATCAGTTCACCAGCGGCGGCGGCGACGACGACGACTTCATCGGTGCCGGCGCCAAAAGGCGGTCGAGCCGTACGTGAAGTTGCTGACAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E271232] SGN-U579452 Tomato 200607 Build 2 33 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T85037 [Download][View] Facility Assigned ID: TGFAR52TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0062 Quality Trim Threshold: 14.5