EST details — SGN-E271261
| Search information |
| Request: 271261 | Match: SGN-E271261 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64091 | Clone name: cLEM-5-B23 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177831 is on microarray TOM1: SGN-S1-1-4.2.6.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177831 [TUS-27-J5] | Trace: SGN-T183085 | EST: SGN-E370848 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177831 [TUS-27-J5] | Trace: SGN-T183086 | EST: SGN-E370849 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271261 | Length: 535 bp (1021 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271261 [] (trimmed)
GGACAAACTGGTAGAAAGATCCATTTTAATAATGGAAACTTAATCAGTGTTAAAAAGGAATCAAGCTCCAATAGTATTCAGGACGGACCCATCAA
TTACACTCAAGAGCATCTCCTAACAGGTTCTGTCCCCCCATCCTTGATTGAGAAGGCAATGACATCCATCTGTCTTATCACTGTTGATGATGGGG
CATGGGCTTCAGGAGTTTTGCTCAACAAGCAGGGTCTATTGCTTACAAATGCTCATCTTCTAGAGCCGTGGAGATTTGGGAAAACATCTGTAAAT
GGTTATAACACCAAATCTGATGTAGTTTTCACCACATCTAATCAATCTGAGCATCCAGGGGATGATAAATTTACCATTCACCATAGGAATAAATA
TTTGCTTCAAAAGGAACTAAAAACTCCACAGTTCCTTGTTAACAATGAGCAAGGTAGCTTTAGAGTTAACTTGGCAAACACCAGCAGTAGGACCA
TTCGTGTTCGCTTGGATTTTATGGATCCTTGGGTATGGACAAATGCAGAGGTAGTTCATG
TTACACTCAAGAGCATCTCCTAACAGGTTCTGTCCCCCCATCCTTGATTGAGAAGGCAATGACATCCATCTGTCTTATCACTGTTGATGATGGGG
CATGGGCTTCAGGAGTTTTGCTCAACAAGCAGGGTCTATTGCTTACAAATGCTCATCTTCTAGAGCCGTGGAGATTTGGGAAAACATCTGTAAAT
GGTTATAACACCAAATCTGATGTAGTTTTCACCACATCTAATCAATCTGAGCATCCAGGGGATGATAAATTTACCATTCACCATAGGAATAAATA
TTTGCTTCAAAAGGAACTAAAAACTCCACAGTTCCTTGTTAACAATGAGCAAGGTAGCTTTAGAGTTAACTTGGCAAACACCAGCAGTAGGACCA
TTCGTGTTCGCTTGGATTTTATGGATCCTTGGGTATGGACAAATGCAGAGGTAGTTCATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271261] | SGN-U571165 | Tomato 200607 | Build 2 | 28 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85066 [Download][View] | Facility Assigned ID: TGFAS12TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0111 | Quality Trim Threshold: 14.5 |
Working
