EST details — SGN-E271266
| Search information |
| Request: 271266 | Match: SGN-E271266 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64140 | Clone name: cLEM-5-D9 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177857 is on microarray TOM1: SGN-S1-1-2.3.6.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177857 [TUS-27-K7] | Trace: SGN-T182802 | EST: SGN-E371294 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177857 [TUS-27-K7] | Trace: SGN-T182803 | EST: SGN-E371295 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271266 | Length: 540 bp (1014 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271266 [] (trimmed)
ACTTGAGGTGAAGATGAGGCCTATGTTTGTCGGGAACTTTGAGTTTGATACTCGTCAGTCAGAACTGGAACGGTTTTTTTCCAAGTATGGAAGAA
TTGAGCGAGTCGACATGAAATCTGGCACATCTACTAAGGAAAAAGAGCTTCTATCATGGCTCAACACTTCTGTGCCCCTATCTGCCTGCTTGATC
TCCTCCTTCTCACTGATGCAATTGTGTTCTGAATTTCTTACATCGATCTTCTGTCATTCACTTACTTCACTACTTATGTTGCTTATCACGAGAAT
GATCATGGTGGGATCAGTCAGTTCATCATGCCATGCCTACAACTACTAATAAAGGGGATCAATGAATTATATCATGCCATGCCTACCAATTCTGA
AAATCGTGCTCTGAAATTGGTGATGCATGCTTAGCAATGACTACTCAGACCTGAGTTTTAAACCCTTAATAAGCCTTCATCACCTCGACCATCAT
CATCATCATCATGATCTAGTTCATGCAAGGCCTCTACTTCCTTACTTTCCTCAAGTCCTCACATA
TTGAGCGAGTCGACATGAAATCTGGCACATCTACTAAGGAAAAAGAGCTTCTATCATGGCTCAACACTTCTGTGCCCCTATCTGCCTGCTTGATC
TCCTCCTTCTCACTGATGCAATTGTGTTCTGAATTTCTTACATCGATCTTCTGTCATTCACTTACTTCACTACTTATGTTGCTTATCACGAGAAT
GATCATGGTGGGATCAGTCAGTTCATCATGCCATGCCTACAACTACTAATAAAGGGGATCAATGAATTATATCATGCCATGCCTACCAATTCTGA
AAATCGTGCTCTGAAATTGGTGATGCATGCTTAGCAATGACTACTCAGACCTGAGTTTTAAACCCTTAATAAGCCTTCATCACCTCGACCATCAT
CATCATCATCATGATCTAGTTCATGCAAGGCCTCTACTTCCTTACTTTCCTCAAGTCCTCACATA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271266] | SGN-U568641 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85071 [Download][View] | Facility Assigned ID: TGFAS17TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0080 | Quality Trim Threshold: 14.5 |
Working
