EST details — SGN-E271270

Search information 
Request: 271270Match: SGN-E271270
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C64175Clone name: cLEM-5-F3
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: Alias clone SGN-C177875 is on microarray TOM1: SGN-S1-1-8.4.6.9
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C177875 [TUS-27-L1] Trace: SGN-T183167 EST: SGN-E370930 Direction: 3' Facility: INRA
Clone: SGN-C177875 [TUS-27-L1] Trace: SGN-T183168 EST: SGN-E370931 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E271270Length: 353 bp (1036 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E271270 [] (trimmed) GGTCGTTGTCAGAATCGGCTGCCGCGGCTATTCTGATTCAATTGGTTTCTGCGATTAGCTATTGTCATCATATGGGTGTAGCTCATCGTGACATT
AAGCCGGATAATGTGTTGTTTGATTCTGAGAATAGATTGAAGCTTGCTGATTTTGGATCTGCGGAGTGGTTTGCTGGTTGTGATGGGAGGAAGAT
GAATGGGGTTGTGGGTACGCCGTATTACGTTGCGCCGGAGGTTTTAATGGGGAAAGAGTATAATGAGAAAGTTGATGTGTGGAGTTTGGGGGTTA
TTTTGTATATTATGCTTTCTGGGGTTCCTCCTTTTTACGGTGAAACGCCGACTGAAACTTTTCAAGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E271270] SGN-U564186 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T85075 [Download][View] Facility Assigned ID: TGFAS26TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0052 Quality Trim Threshold: 14.5