EST details — SGN-E271315
| Search information |
| Request: 271315 | Match: SGN-E271315 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64169 | Clone name: cLEM-5-F18 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177872 is on microarray TOM1: SGN-S1-1-3.3.6.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177872 [TUS-27-K22] | Trace: SGN-T183030 | EST: SGN-E370655 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177872 [TUS-27-K22] | Trace: SGN-T183031 | EST: SGN-E370656 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271315 | Length: 506 bp (621 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271315 [] (trimmed)
GCAAACTTTTAATAACAAAACTTCATCAAATTGTCCATTCAAGATTCTTTGATTTTCTGTTTCTTTCTAATTTCTTTGATTTTCAAAGAACCCAA
ACTGCGAATTTGTTTTGTGAAAGAGATCTATGATATTACTGCAATCTCCCTCTAGATATCTTCTTCAGATCTTGTACAATCGCGTCCAGAGTCTT
GAGAAAGGGGTTGAACTGGACAGCCAATGGGTTGAATTTGATGATATCCGTTACCATATTCAGGGTTCAGTGAAAAATCCAAATGTCTTGCTTCT
TTCTGTATCATTGCCCATACCACCTCCAGAAACCGTCCTCTTTGGTGGACTTCCACTTGGAGCGCTAGAAGCCATAAAAGCAGCATATGGTGCAG
TTGCACAAATTCTTGATCCTCCAAGAGATGGGTTTAATCTCACACTTAAACTAAACTTGTCAAAACTTCCCCCAGATGAAGGTTCTGCAAGTTTC
CTCTTTAAGAGCAAAAACATGCACTCCTGAC
ACTGCGAATTTGTTTTGTGAAAGAGATCTATGATATTACTGCAATCTCCCTCTAGATATCTTCTTCAGATCTTGTACAATCGCGTCCAGAGTCTT
GAGAAAGGGGTTGAACTGGACAGCCAATGGGTTGAATTTGATGATATCCGTTACCATATTCAGGGTTCAGTGAAAAATCCAAATGTCTTGCTTCT
TTCTGTATCATTGCCCATACCACCTCCAGAAACCGTCCTCTTTGGTGGACTTCCACTTGGAGCGCTAGAAGCCATAAAAGCAGCATATGGTGCAG
TTGCACAAATTCTTGATCCTCCAAGAGATGGGTTTAATCTCACACTTAAACTAAACTTGTCAAAACTTCCCCCAGATGAAGGTTCTGCAAGTTTC
CTCTTTAAGAGCAAAAACATGCACTCCTGAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271315] | SGN-U580239 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85120 [Download][View] | Facility Assigned ID: TGFAT33TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.956 | Expected Error Rate: 0.0037 | Quality Trim Threshold: 14.5 |
Working
