EST details — SGN-E271345
| Search information |
| Request: 271345 | Match: SGN-E271345 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64157 | Clone name: cLEM-5-E3 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177866 is on microarray TOM1: SGN-S1-1-1.3.6.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177866 [TUS-27-K16] | Trace: SGN-T183028 | EST: SGN-E370653 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177866 [TUS-27-K16] | Trace: SGN-T183029 | EST: SGN-E370654 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271345 | Length: 492 bp (1023 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271345 [] (trimmed)
GATCTACTCAGTGTGCTAGAAACAATTAATTTGCTAATCATTGGCGGCCCAGAAACTGATCCTGGCAGAGATTCAAATAAGCTGACTAATAAAAC
AGTCTTAGTTCAGAAAAAGGTCTTGGACCATCTTTTCATGTTAGGAGTTGAAAGTCAATGGGCTCCAGTTCCAGTGCGTTGTGCGGCACTTCATT
GCATTGGTGATCTGATTGCGAATCACCCAAAGAATCTTGAAGAACTTGCAAGCAAAAGGCTCGGAGAGGAACCAGATTTAGAGCCTGCTTTGAAT
TCTGTTCTCCGGATACTTTTGCGCACTTCTAGTAAGCAAGAATTCATGGCAGCTGACTATATCTTTAAGAACTTCTGTCAGCAAAATCCAGATGG
CCAGACAATGTTGGCATCTACTCTAATTCTGCAGCCACAGTCAATGATTCATGCCCCTGTTGAGGAGGATATTAACATGTCATTTGGAAGCATGC
TTCTACATGGTCTTACC
AGTCTTAGTTCAGAAAAAGGTCTTGGACCATCTTTTCATGTTAGGAGTTGAAAGTCAATGGGCTCCAGTTCCAGTGCGTTGTGCGGCACTTCATT
GCATTGGTGATCTGATTGCGAATCACCCAAAGAATCTTGAAGAACTTGCAAGCAAAAGGCTCGGAGAGGAACCAGATTTAGAGCCTGCTTTGAAT
TCTGTTCTCCGGATACTTTTGCGCACTTCTAGTAAGCAAGAATTCATGGCAGCTGACTATATCTTTAAGAACTTCTGTCAGCAAAATCCAGATGG
CCAGACAATGTTGGCATCTACTCTAATTCTGCAGCCACAGTCAATGATTCATGCCCCTGTTGAGGAGGATATTAACATGTCATTTGGAAGCATGC
TTCTACATGGTCTTACC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271345] | SGN-U582525 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85150 [Download][View] | Facility Assigned ID: TGFAQ26TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0102 | Quality Trim Threshold: 14.5 |
Working
