EST details — SGN-C27147
| Search information |
| Request: 27147 | Match: SGN-C27147 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C27147 | Clone name: cLEF-42-L1 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C183091 is on microarray TOM1: SGN-S1-1-8.1.3.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183091 [TUS-41-E9] | Trace: SGN-T191479 | EST: SGN-E390153 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183091 [TUS-41-E9] | Trace: SGN-T191694 | EST: SGN-E390368 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247590 | Length: 539 bp (969 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247590 [] (trimmed)
GTCGAAAATGGCGATTTCCGTGGCTTCTCTTGCTTCATCTTTTGCTTCCCTTTCATTTTCTTCTCAGATTTCTCAAAAACCCTATGCTGTATCCC
TTGCTCATTCGAAGCAATTCTCTTTCTCTCTCGCTTCCAAAATCTCTACGCTTGTAGTGTCAGCTTCTGTTGCTGAAGCACCGGAGACGGAGGAA
TTGGAAACCAGAGAGAATCTTTTGAAGCTTGTGAAAAGTAGACTTCCTGGAGGTTTCGCTGCACAGCCTATTTTTGGAACTGGTAGACGTAAAAG
TGCTAGTGCTCGTGTTGTTCTTCAGGAAGGTTCTGGAAAAATCATCATCAACTATCGTGATGCTAAGGAATATCTTCAAGGAAATCCATTATGGA
TTCAATATGTCAAAACTCCACTGGCCACTTTAGGATATGAGGCTAGTTATGACATTTTTGTCAAGGTGGAAGGCGGTGGTCTTTCTGGGCAGGCT
CAAGCAATTTCCCTTGGCATTGCTCGTGCACTCCTAAAGGTTAGTGAGAGCCATAGAAAACCAT
TTGCTCATTCGAAGCAATTCTCTTTCTCTCTCGCTTCCAAAATCTCTACGCTTGTAGTGTCAGCTTCTGTTGCTGAAGCACCGGAGACGGAGGAA
TTGGAAACCAGAGAGAATCTTTTGAAGCTTGTGAAAAGTAGACTTCCTGGAGGTTTCGCTGCACAGCCTATTTTTGGAACTGGTAGACGTAAAAG
TGCTAGTGCTCGTGTTGTTCTTCAGGAAGGTTCTGGAAAAATCATCATCAACTATCGTGATGCTAAGGAATATCTTCAAGGAAATCCATTATGGA
TTCAATATGTCAAAACTCCACTGGCCACTTTAGGATATGAGGCTAGTTATGACATTTTTGTCAAGGTGGAAGGCGGTGGTCTTTCTGGGCAGGCT
CAAGCAATTTCCCTTGGCATTGCTCGTGCACTCCTAAAGGTTAGTGAGAGCCATAGAAAACCAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247590] | SGN-U577756 | Tomato 200607 | Build 2 | 32 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60634 [Download][View] | Facility Assigned ID: TMGGK61TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0071 | Quality Trim Threshold: 14.5 |
Working
