EST details — SGN-E271484
| Search information |
| Request: 271484 | Match: SGN-E271484 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64304 | Clone name: cLEM-5-L8 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177947 is on microarray TOM1: SGN-S1-1-8.3.6.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177947 [TUS-27-O1] | Trace: SGN-T182900 | EST: SGN-E371392 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177947 [TUS-27-O1] | Trace: SGN-T182901 | EST: SGN-E371393 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271484 | Length: 513 bp (624 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271484 [] (trimmed)
GGCTAAAGTGGAGAAGGCAGCTAAAACTATTTCAGACATCAGTTTGGAAGTCGACAGGCTGGCTAGACAGGTTTCTGCACTCGAATCTGTAGTTT
CTAAAGGTGGGAAAGTTGTAGAAAAGGATGTGATAAATCTAACAGAGTTGTTGATGAATCAACTGCTTCAATTGGATGGTATTATTGCTGAAGGT
GATATAAAACTGCAGAGAAAAAATCAGGTGAGAAAAGTGCAAAAGTGTGTTGAAACACTAGATGTATTGAAGATAAAAAATTCAATGCCAACAAA
CAATGGAAACCACACTCCGAAAGACCAATCTCCCCCAGCTCGTCCTCATCAAGATTATATGTATTTGAATGAGCAGGCATCATCACCAGTTCAAC
AACATCAAGATAGACATTCCTTTAGAAATTCACCAGTACAAAGCAAACAGCAGCACCAATCGAGGCACTCAACCTCAGGGTCTGTTGTCATAACA
ACACAATGGGAAACATTTGATTCCACTCCAGCGCCATT
CTAAAGGTGGGAAAGTTGTAGAAAAGGATGTGATAAATCTAACAGAGTTGTTGATGAATCAACTGCTTCAATTGGATGGTATTATTGCTGAAGGT
GATATAAAACTGCAGAGAAAAAATCAGGTGAGAAAAGTGCAAAAGTGTGTTGAAACACTAGATGTATTGAAGATAAAAAATTCAATGCCAACAAA
CAATGGAAACCACACTCCGAAAGACCAATCTCCCCCAGCTCGTCCTCATCAAGATTATATGTATTTGAATGAGCAGGCATCATCACCAGTTCAAC
AACATCAAGATAGACATTCCTTTAGAAATTCACCAGTACAAAGCAAACAGCAGCACCAATCGAGGCACTCAACCTCAGGGTCTGTTGTCATAACA
ACACAATGGGAAACATTTGATTCCACTCCAGCGCCATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271484] | SGN-U577796 | Tomato 200607 | Build 2 | 30 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85289 [Download][View] | Facility Assigned ID: TGFAT64TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0023 | Quality Trim Threshold: 14.5 |
Working
