EST details — SGN-E271764
| Search information |
| Request: 271764 | Match: SGN-E271764 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C65093 | Clone name: cLEM-8-E9 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178270 is on microarray TOM1: SGN-S1-1-5.4.4.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178270 [TUS-28-L12] | Trace: SGN-T183663 | EST: SGN-E370731 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178270 [TUS-28-L12] | Trace: SGN-T183664 | EST: SGN-E370732 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271764 | Length: 605 bp (838 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271764 [] (trimmed)
GGATCATCATCAACGAGAGCGTGATGGGGCTCACATTCACCAAGCTCTTCAGTCGGCTTTTCGCCAAGAAGGAAATGCGCATTCTAATGGTTGGT
CTTGATGCAGCTGGTAAGACCACCATATTGTACAAGTTGAAGCTGGGAGAGATCGTGACTACTATTCCTACCATTGGTTTCAATGTGGAGACTGT
TGAGTACAAGAACATCAGCTTCACTGTTTGGGATGTCGGAGGTCAGGACAAGATCCGTCCATTGTGGAGGCACTACTTCCAGAACACTCAGGGTC
TCATTTTTGTGGTTGATAGCAATGATAGAGACCGTGTTGTAGAAGCAAGAGATGAATTGCATAGGATGTTGAACGAGGATGAACTTCGGGATGCT
GTGCTTCTAGTATTTGCTAACAAACAAGATCTTCCTAACGCAATGAATGCTGCTGAAATAACTGATAAGCTTGGACTGCACTCCCTCAGGCAGCG
TCACTGGTACATCCAGAGCACTTGTGCAACTTCTGGCGAGGGGCTTTATGAGGGACTTGATTGGCTTTCTAACAACATTGCTAACAAGGCTTAAA
GTGATGCAGATTTGTTATTGTGGGTTGATCCTGGA
CTTGATGCAGCTGGTAAGACCACCATATTGTACAAGTTGAAGCTGGGAGAGATCGTGACTACTATTCCTACCATTGGTTTCAATGTGGAGACTGT
TGAGTACAAGAACATCAGCTTCACTGTTTGGGATGTCGGAGGTCAGGACAAGATCCGTCCATTGTGGAGGCACTACTTCCAGAACACTCAGGGTC
TCATTTTTGTGGTTGATAGCAATGATAGAGACCGTGTTGTAGAAGCAAGAGATGAATTGCATAGGATGTTGAACGAGGATGAACTTCGGGATGCT
GTGCTTCTAGTATTTGCTAACAAACAAGATCTTCCTAACGCAATGAATGCTGCTGAAATAACTGATAAGCTTGGACTGCACTCCCTCAGGCAGCG
TCACTGGTACATCCAGAGCACTTGTGCAACTTCTGGCGAGGGGCTTTATGAGGGACTTGATTGGCTTTCTAACAACATTGCTAACAAGGCTTAAA
GTGATGCAGATTTGTTATTGTGGGTTGATCCTGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271764] | SGN-U580248 | Tomato 200607 | Build 2 | 52 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85315 [Download][View] | Facility Assigned ID: TGFBC29TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0015 | Quality Trim Threshold: 20.5 |
Working
