EST details — SGN-E271840

Search information 
Request: 271840Match: SGN-E271840
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C65018Clone name: cLEM-8-B15
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: Alias clone SGN-C178219 is on microarray TOM1: SGN-S1-1-8.2.4.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178219 [TUS-28-J9] Trace: SGN-T183573 EST: SGN-E371213 Direction: 3' Facility: INRA
Clone: SGN-C178219 [TUS-28-J9] Trace: SGN-T183574 EST: SGN-E371214 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E271840Length: 425 bp (958 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E271840 [] (trimmed) GCAATTACTTCTTCCTTCTCACTTTTCCTCCCAACCCCATTACTTCTCTCACTCCATTTCACAATTCCCTTCACAAATCCAACTCCACGCGCCGT
TCTGTATCAGTCACTAAATCACACGCGCCGTCGTCGTTGCTAGCTGAAGCCCCAGATGAAACGGTTGTTTCCGGCGATGAAATAACCAACGCGCC
ACCGGAGGAAGGACCCATTGAGCTCCCATCTTCAATAACGGATGTTTTTGCTACTTCTGATGACCCTTCGCCGCTTCAAACCGCCACCAGTCTTC
TCCTCACCGGAGCTATATCGGTTTTCCTCTTCCGCTCCCTCCGCCGCCGCGCTAAACGAGCCAAAGAACTGAAACTTAGGTCAACGGGGGCGAAG
AAAACGTTGAAGGAGGAGGCAGTGGAGAGTTTGAAAGCTATTACG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E271840] SGN-U566283 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T85391 [Download][View] Facility Assigned ID: TGFBE08TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0141 Quality Trim Threshold: 14.5