EST details — SGN-E271866
| Search information |
| Request: 271866 | Match: SGN-E271866 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C65273 | Clone name: cLEM-8-N15 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178380 is on microarray TOM1: SGN-S1-1-7.1.4.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178380 [TUS-29-A2] | Trace: SGN-T1485 | EST: SGN-E378391 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C178380 [TUS-29-A2] | Trace: SGN-T183957 | EST: SGN-E371628 | Direction: 5' | Facility: INRA |
| Clone: SGN-C178380 [TUS-29-A2] | Trace: SGN-T184030 | EST: SGN-E371701 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271866 | Length: 574 bp (977 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271866 [] (trimmed)
AACAGCAATTGGAAACCCTCATTGGAGAATTTACCGGGAGAATTATTTTTTTCATCTTCTGGCCGGCGACTGATCGGAGATGGTTTCACCGGAGA
GTACCAATTGGCTTTATGATTACGGATTCGAAGATAGTTGCGTCCCTGATTCGAATTTCTCAGCTTCTGCATCTGGGTTTAACTGGTCTGTGCAG
AATTTGAATGGTTCAAGGAATGTTAGTTCTGAAATCGATGGGTCAATTGGTGAATCAGATTACCCCAAGGAAAGTGGTTCTAAGAAACGGGCAAG
GGTTGAATCATGTGCTCCAACAAGTTCCAAAGCTTGCAGAGAGAAACTGCGAAGAGATAGGCTGAATGACAAGTTCATGGAATTGGGTGCACTCC
TTGAGCCTGGAAGACCCCCTAAAACAGACAAATCCGCTATTCTTGTTGATGCTGTTCGCTTGGTGACCCAGTTACGTGATGAAGCTCAAAAGTTG
AAAGACTCAAACTTGAATCTGCAAGAAAAGATCAAGGAGTTAAAGGTTGAGAAAACCGAGCTTCGAGATGAAAAACACAGGCTGAAAGCTGAAAA
GGAG
GTACCAATTGGCTTTATGATTACGGATTCGAAGATAGTTGCGTCCCTGATTCGAATTTCTCAGCTTCTGCATCTGGGTTTAACTGGTCTGTGCAG
AATTTGAATGGTTCAAGGAATGTTAGTTCTGAAATCGATGGGTCAATTGGTGAATCAGATTACCCCAAGGAAAGTGGTTCTAAGAAACGGGCAAG
GGTTGAATCATGTGCTCCAACAAGTTCCAAAGCTTGCAGAGAGAAACTGCGAAGAGATAGGCTGAATGACAAGTTCATGGAATTGGGTGCACTCC
TTGAGCCTGGAAGACCCCCTAAAACAGACAAATCCGCTATTCTTGTTGATGCTGTTCGCTTGGTGACCCAGTTACGTGATGAAGCTCAAAAGTTG
AAAGACTCAAACTTGAATCTGCAAGAAAAGATCAAGGAGTTAAAGGTTGAGAAAACCGAGCTTCGAGATGAAAAACACAGGCTGAAAGCTGAAAA
GGAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271866] | SGN-U575250 | Tomato 200607 | Build 2 | 43 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85417 [Download][View] | Facility Assigned ID: TGFBE80TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0052 | Quality Trim Threshold: 14.5 |
Working
