EST details — SGN-E271892
| Search information |
| Request: 271892 | Match: SGN-E271892 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C65158 | Clone name: cLEM-8-H8 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178304 is on microarray TOM1: SGN-S1-1-3.1.4.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178304 [TUS-28-M22] | Trace: SGN-T183451 | EST: SGN-E370261 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178304 [TUS-28-M22] | Trace: SGN-T183452 | EST: SGN-E370262 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271892 | Length: 583 bp (963 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271892 [] (trimmed)
GAGACAAACGACAGTTCCAGAGATGGGATGATCAACATATCCTCCAGCTTCGTCAAGAGTTTTTGCGTCTTAAAGATGCAGTGGTTTTGTACACA
ATGCACCCATGGGAAAGAGATGCTCGTTTGTTCAAGGAAGCATTATTATTGCAAGTACCTAAACATGATGTTCTCATTGAGATTGCTTGCACTCG
ATCCTCTGAAGATCTTCTTGGAGCCAGAAAAGCTTACCATTCCCTTTTTGAACACTCAATTGAGGAAGACATTGCCTTCCATGTTCGAAGTTCTG
AAAGAAAGCTTCTAGTTGCTCTTGTAAGTTCCTACCGTTATGAAGGTCCACGAGTAAACGATGATCTTGCAAAATCTGAGGCTAAGATTTTTGTA
AATGCAATAAAAAATGCCAACAAGAAGAAGCTGATTGATGAGGATGAAGAGATTGTGAGGATCCTTTCGACAAGAAGCAAGCTCCATCTTAAGGC
CATCTATAGCCATTACAAGGAAATCACTGGCAACTTCTTGGACGAGGATCTTGAGTGTGACTTGACCTTGAAACAAGTTGTTCAATGCCTTTGTA
TACCTAAAGCATA
ATGCACCCATGGGAAAGAGATGCTCGTTTGTTCAAGGAAGCATTATTATTGCAAGTACCTAAACATGATGTTCTCATTGAGATTGCTTGCACTCG
ATCCTCTGAAGATCTTCTTGGAGCCAGAAAAGCTTACCATTCCCTTTTTGAACACTCAATTGAGGAAGACATTGCCTTCCATGTTCGAAGTTCTG
AAAGAAAGCTTCTAGTTGCTCTTGTAAGTTCCTACCGTTATGAAGGTCCACGAGTAAACGATGATCTTGCAAAATCTGAGGCTAAGATTTTTGTA
AATGCAATAAAAAATGCCAACAAGAAGAAGCTGATTGATGAGGATGAAGAGATTGTGAGGATCCTTTCGACAAGAAGCAAGCTCCATCTTAAGGC
CATCTATAGCCATTACAAGGAAATCACTGGCAACTTCTTGGACGAGGATCTTGAGTGTGACTTGACCTTGAAACAAGTTGTTCAATGCCTTTGTA
TACCTAAAGCATA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271892] | SGN-U578779 | Tomato 200607 | Build 2 | 47 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85443 [Download][View] | Facility Assigned ID: TGFBF40TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0074 | Quality Trim Threshold: 14.5 |
Working
