EST details — SGN-E271943
| Search information |
| Request: 271943 | Match: SGN-E271943 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C65207 | Clone name: cLEM-8-K13 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178331 is on microarray TOM1: SGN-S1-1-8.3.4.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178331 [TUS-28-O1] | Trace: SGN-T183250 | EST: SGN-E370323 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178331 [TUS-28-O1] | Trace: SGN-T183251 | EST: SGN-E370324 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271943 | Length: 696 bp (839 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271943 [] (trimmed)
GAAATCATGATACTCGTAACAAATGTTTGCCACCCCCATTAGCCGCTTTTTTCTTTCAACATAATTCTCACTTCAATTCGTCCCAAAAAATCAAT
TATCATGCCGATGGATTTAATTCATTGCGCCATAAATTAGGAAGCTGGGTGTTCAGTTAGTGTGGCAATCGGAAATGTCGAATGTTGTAGTTTTG
GACAACGGCGCCGGCGTAATCAAGGCTGGTATCGGCGGCGAAAGAGATCCAACAGCTATTGTCCCCAACAGCATGGGCCGTCCACTTTCTTCCAA
GAAATGGCTTATGGCTGACCAGCTTCTTTCCCCAGACGTCGACCTCACTTCAGCCACCGCCCGCCGCCCTTTCGACCGCGGTTATCTTATCAACC
CTGATCTCCAATCTTCCATTTGGTCTCACATCTTCTCGAACCTTCTCAAAATTACTCCTTCACACTCTTCTCTACTTCTTACTGAACCCCTTTTC
AATATCCCTTCCATACAACGTTCAATCGACGAAATTGTATTCGAAGATTTTAATTTTAAGGCTCTTTATGTATCAGATTCCCCCTCTTTAGTTCA
TCTTTATGAAGCATCTCGTCGCCCTTATGGCCTTGTTTCTAAAGCCCAGTGTAGCTTAGTTGTCGACTGTGGATTTTCCTTTACTCATGCTTTCC
CCGTAGTTCAGAATTTTACATTGAATTATGC
TATCATGCCGATGGATTTAATTCATTGCGCCATAAATTAGGAAGCTGGGTGTTCAGTTAGTGTGGCAATCGGAAATGTCGAATGTTGTAGTTTTG
GACAACGGCGCCGGCGTAATCAAGGCTGGTATCGGCGGCGAAAGAGATCCAACAGCTATTGTCCCCAACAGCATGGGCCGTCCACTTTCTTCCAA
GAAATGGCTTATGGCTGACCAGCTTCTTTCCCCAGACGTCGACCTCACTTCAGCCACCGCCCGCCGCCCTTTCGACCGCGGTTATCTTATCAACC
CTGATCTCCAATCTTCCATTTGGTCTCACATCTTCTCGAACCTTCTCAAAATTACTCCTTCACACTCTTCTCTACTTCTTACTGAACCCCTTTTC
AATATCCCTTCCATACAACGTTCAATCGACGAAATTGTATTCGAAGATTTTAATTTTAAGGCTCTTTATGTATCAGATTCCCCCTCTTTAGTTCA
TCTTTATGAAGCATCTCGTCGCCCTTATGGCCTTGTTTCTAAAGCCCAGTGTAGCTTAGTTGTCGACTGTGGATTTTCCTTTACTCATGCTTTCC
CCGTAGTTCAGAATTTTACATTGAATTATGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271943] | SGN-U573613 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85494 [Download][View] | Facility Assigned ID: TGFBC67TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0075 | Quality Trim Threshold: 14.5 |
Working
