EST details — SGN-E271994
| Search information |
| Request: 271994 | Match: SGN-E271994 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C65261 | Clone name: cLEM-8-M4 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178369 is on microarray TOM1: SGN-S1-1-2.4.4.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178369 [TUS-28-P15] | Trace: SGN-T183606 | EST: SGN-E371246 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178369 [TUS-28-P15] | Trace: SGN-T183607 | EST: SGN-E371247 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271994 | Length: 593 bp (887 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271994 [] (trimmed)
GGTTACAGCTATGGAGATTTCGAATTTGAGAAAATTAATTCTAATGCTTCTATTTCTCAGCTCATTTCAACTGTGTAAAGCATTTGGAGGAGTTG
TTAATCCGCTAGCGAAGTTGAGATTCGACGGAAAAAATGGTGAGTTTAGGATTTTGCAGGTGGCGGATATGCACTACGGAGATGGAAAAACGACG
CCGTGTGAAGATGTGTTGCCGAAGCAGATGTCTTCGTGTTCCGATCTCAATACTACGGATTTCATTTTCAGGATGATTCACGCCGAGAAACCTCA
TCTCATCGTGTTCACCGGGGACAACATATTTGGATCTGATGCTACAGATCCTGTAAATTCCATGGATGCTGCTTTTGCTCCTGCAATATCTTCAA
ACATACCATGGGCTGCAGTACTAGGAAATCATGACCAGGAATCTACACTCTCAAGGGAAGGCGTGATGAAACATATCATTGGCATGAAAAGTACT
TTATCTCAATTGAATCCTCCCGACGTTCCTGATATTGATGGTTTTGGGAATTATAATCTGGAAGTCCATGGGACTGAGGGTTCCGAGCTGACTAA
TAAGTCCGTTCTCAATCTGTATT
TTAATCCGCTAGCGAAGTTGAGATTCGACGGAAAAAATGGTGAGTTTAGGATTTTGCAGGTGGCGGATATGCACTACGGAGATGGAAAAACGACG
CCGTGTGAAGATGTGTTGCCGAAGCAGATGTCTTCGTGTTCCGATCTCAATACTACGGATTTCATTTTCAGGATGATTCACGCCGAGAAACCTCA
TCTCATCGTGTTCACCGGGGACAACATATTTGGATCTGATGCTACAGATCCTGTAAATTCCATGGATGCTGCTTTTGCTCCTGCAATATCTTCAA
ACATACCATGGGCTGCAGTACTAGGAAATCATGACCAGGAATCTACACTCTCAAGGGAAGGCGTGATGAAACATATCATTGGCATGAAAAGTACT
TTATCTCAATTGAATCCTCCCGACGTTCCTGATATTGATGGTTTTGGGAATTATAATCTGGAAGTCCATGGGACTGAGGGTTCCGAGCTGACTAA
TAAGTCCGTTCTCAATCTGTATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271994] | SGN-U568888 | Tomato 200607 | Build 2 | 24 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85545 [Download][View] | Facility Assigned ID: TGFBD74TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0051 | Quality Trim Threshold: 14.5 |
Working
