EST details — SGN-E272004

Search information 
Request: 272004Match: SGN-E272004
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C65300Clone name: cLEM-8-O20
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: Alias clone SGN-C178397 is on microarray TOM1: SGN-S1-1-6.1.4.21
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178397 [TUS-29-A19] Trace: SGN-T183753 EST: SGN-E370412 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E272004Length: 434 bp (890 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E272004 [] (trimmed) GCCGCATCTCGCTGGTCTCCTTTTCAATCCCAACCCCACCATACATTCTTCATCCCAAAAACCATCCAGTCACCATTTCATCTCCTCTTAAACCC
AACAAAATTCGACCCCATTAAACCAAATTCTACAGCTGCTGAAACCACTTTCTTTGACAACACAGACCCAGAGGAGATCTCCACTTATGACCCTC
CAGAGCGTCCTGGAGACTGTATAGAACCAGCATCTTTCGATGACGGTCCAATGGAGTCTGAAGAAGAAATTGCAAAAGCGTATGAAGAGCTTTAT
GGGGCTGCTTATAGCGGAGAGACTTTTCTTGGGAATGACATATATGCAATGGATTCTAAGGTGAAAAAGACTACCTCGTTTGGGAAAACCAAGAA
GGAGAAGGCCAAAGATGGGTTTGACGAGAGAGTGGTGCAAGTTAGGAGAGTTAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E272004] SGN-U578920 Tomato 200607 Build 2 80 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T85555 [Download][View] Facility Assigned ID: TGFBD94TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0117 Quality Trim Threshold: 14.5