EST details — SGN-C27226
| Search information |
| Request: 27226 | Match: SGN-C27226 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C27226 | Clone name: cLEF-42-O4 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176673 is on microarray TOM1: SGN-S1-1-2.1.9.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176673 [TUS-24-I23] | Trace: SGN-T192969 | EST: SGN-E391643 | Direction: 5' | Facility: INRA |
| Clone: SGN-C176673 [TUS-24-I23] | Trace: SGN-T193203 | EST: SGN-E391877 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247557 | Length: 569 bp (1015 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247557 [] (trimmed)
ATTTTCTTGAATTTTTGATGTCTATATCCATTGAAGGGAACTCTGATAAGAGCTGTGTTTCATCAATGGACAGTAAAGATTTGAACTTTAAGGCA
ACTGAACTTAGACTAGGCTTGCCTGGTTCTGAATCACCACCAGATAAGAATGATTACCCACTTGGGGTTTTGAAAATTTTCCCTTCTGGAGCTAA
AAGGGGTTTTTCTGATACCATAAATGGTGATTCTGGGAGATGGGGTTTTGGATCTGAAGTTGATTTTGTTAAAAACAGTAGCTTTATTGTTTCTC
CAAAGGGTGTAAAAGTTGGAAATAAGATTCTTGGTTCTGTTTGCAATGAGAGTAGCTCTGTGAAAGAGGGAACTCCAAAATCACCTAGACCAGTG
GAAGAGAAAAAGGCCTTGATTTGTAGTACTAATAGTCATGGGGTTGCTCCAGCTGCAAAGGCACAAGTAGTAGGATGGCCACCAATTAGATCTTT
TCGGAAGAATATGGTTAGTAATCCTCCAAAGACTGAGGAAGATGCAAATGGTAAGCTAGTAGCAGGTTGTCATTATGTCAAAGTCAGCATGGAT
ACTGAACTTAGACTAGGCTTGCCTGGTTCTGAATCACCACCAGATAAGAATGATTACCCACTTGGGGTTTTGAAAATTTTCCCTTCTGGAGCTAA
AAGGGGTTTTTCTGATACCATAAATGGTGATTCTGGGAGATGGGGTTTTGGATCTGAAGTTGATTTTGTTAAAAACAGTAGCTTTATTGTTTCTC
CAAAGGGTGTAAAAGTTGGAAATAAGATTCTTGGTTCTGTTTGCAATGAGAGTAGCTCTGTGAAAGAGGGAACTCCAAAATCACCTAGACCAGTG
GAAGAGAAAAAGGCCTTGATTTGTAGTACTAATAGTCATGGGGTTGCTCCAGCTGCAAAGGCACAAGTAGTAGGATGGCCACCAATTAGATCTTT
TCGGAAGAATATGGTTAGTAATCCTCCAAAGACTGAGGAAGATGCAAATGGTAAGCTAGTAGCAGGTTGTCATTATGTCAAAGTCAGCATGGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247557] | SGN-U581702 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60601 [Download][View] | Facility Assigned ID: TMGGJ86TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.948 | Expected Error Rate: 0.0116 | Quality Trim Threshold: 14.5 |
Working
