EST details — SGN-E272327
| Search information |
| Request: 272327 | Match: SGN-E272327 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C61838 | Clone name: cLEM-19-J8 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C183317 is on microarray TOM1: SGN-S1-1-6.2.3.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183317 [TUS-41-N19] | Trace: SGN-T195639 | EST: SGN-E394313 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E272327 | Length: 628 bp (840 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E272327 [] (trimmed)
GGACAATAAATTTGACAATTACGCCTCTGATGGCAATGTTATTGACCAAAGTTTCAATTCCTATAGCACAAGTACTGCTGGAGGTTCAGGCAAAT
TCACAAATTACGCGGCGAATGCCAATGACCCCAATCTGCATTTCACTTCCTATTCCGATCAAGGAACAGGAGGTGTACAGAAATTCACAATATAC
TCACAAGAAGCCAATGCTGGTGACCAGTATTTCAAAAGTTACGGCAAAAATGGGAATGGTGCTAATGGTGAATTCGTCAGCTATGGAAATGACAC
AAATGTTATCGGCTCAACATTTACAAATTATGGTCAGACAGCAAATGGGGGAGACCAAAAATTCACATCTTATGGTTTCAACGGCAATGTTCCTG
AAAATCATTTCACCAACTATGGTGCTGGAGGTAATGGTCCATCTGAAACTTTTAATAGTTACAGAGATCAATCGAATGTTGGAGATGACACATTC
ACTACCTATGTTAAGGATGCAAATGGCGGTGAAGCGAATTTCACCAACTATGGTCAATCATTCAATGAAGGTACTGATGTATTCACTACTTACGG
CAAAAGGGGTAATGACCCACATATCAATTTCAAAACTTACGGAGTTAACAACACTTTC
TCACAAATTACGCGGCGAATGCCAATGACCCCAATCTGCATTTCACTTCCTATTCCGATCAAGGAACAGGAGGTGTACAGAAATTCACAATATAC
TCACAAGAAGCCAATGCTGGTGACCAGTATTTCAAAAGTTACGGCAAAAATGGGAATGGTGCTAATGGTGAATTCGTCAGCTATGGAAATGACAC
AAATGTTATCGGCTCAACATTTACAAATTATGGTCAGACAGCAAATGGGGGAGACCAAAAATTCACATCTTATGGTTTCAACGGCAATGTTCCTG
AAAATCATTTCACCAACTATGGTGCTGGAGGTAATGGTCCATCTGAAACTTTTAATAGTTACAGAGATCAATCGAATGTTGGAGATGACACATTC
ACTACCTATGTTAAGGATGCAAATGGCGGTGAAGCGAATTTCACCAACTATGGTCAATCATTCAATGAAGGTACTGATGTATTCACTACTTACGG
CAAAAGGGGTAATGACCCACATATCAATTTCAAAACTTACGGAGTTAACAACACTTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E272327] | SGN-U586540 | Tomato 200607 | Build 2 | 101 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T86325 [Download][View] | Facility Assigned ID: TGFCX52TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.948 | Expected Error Rate: 0.0043 | Quality Trim Threshold: 14.5 |
Working
