EST details — SGN-E274229
| Search information |
| Request: 274229 | Match: SGN-E274229 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C66685 | Clone name: cLEN-15-C13 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C181007 is on microarray TOM1: SGN-S1-1-4.2.17.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C181007 [TUS-35-N13] | Trace: SGN-T197729 | EST: SGN-E396403 | Direction: 3' | Facility: INRA |
| Clone: SGN-C181007 [TUS-35-N13] | Trace: SGN-T199719 | EST: SGN-E398393 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E274229 | Length: 651 bp (928 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E274229 [] (trimmed)
CGCACGCGGCAAGAGAGAATACATGGAGGCGGAGACAAGTGCAGCTAGTGATACTCCTGTTACTAGGAAGAAGATGATAATGGTGGCTATCGATG
AGAGTGAAGAGAGTTTCTATTCTTTGAAATGGGCATTAGATAATTTGATCAATGATCCTTCTATTATCATCACTCTCATCAATGTCCAAATTCCT
TTTACACCCATGGTTTATCCTGCTGGACCTGTTGTCTTTGCAACACCTACTGTTGTTGAAGCTGTGAGAAAAGGACAACAGGAGAATGCAACTAG
AATACTCTCTCGGGCACTCCATCTCTGCCAACAAAAGATGGTGAAGGCGGAGACTCTGATTGTAGAAGGGGACCCAAAAGATATGATATGTCAAA
CTGCACATGAATTGCACGTTGACCTTCTAGTAATCGGTAGCCGAGGACTTGGCAAGATTAAAAGGGCTTTCTTGGGTAGTGTGAGCGACTATTGT
GCTCATCATGTGCAATGTCCTATTCTCATTGTGAAGCCACCCAAGGAAAACCCCAAAAGCAGCTAATTAACAAGGATATATCATGTGCCAGTCTA
TGAACAATGTCATTTACTTGATGATGAGTAAACACAAGTTCATTGAGGATTATAAAACTTATGTATATATTAATTATATTA
AGAGTGAAGAGAGTTTCTATTCTTTGAAATGGGCATTAGATAATTTGATCAATGATCCTTCTATTATCATCACTCTCATCAATGTCCAAATTCCT
TTTACACCCATGGTTTATCCTGCTGGACCTGTTGTCTTTGCAACACCTACTGTTGTTGAAGCTGTGAGAAAAGGACAACAGGAGAATGCAACTAG
AATACTCTCTCGGGCACTCCATCTCTGCCAACAAAAGATGGTGAAGGCGGAGACTCTGATTGTAGAAGGGGACCCAAAAGATATGATATGTCAAA
CTGCACATGAATTGCACGTTGACCTTCTAGTAATCGGTAGCCGAGGACTTGGCAAGATTAAAAGGGCTTTCTTGGGTAGTGTGAGCGACTATTGT
GCTCATCATGTGCAATGTCCTATTCTCATTGTGAAGCCACCCAAGGAAAACCCCAAAAGCAGCTAATTAACAAGGATATATCATGTGCCAGTCTA
TGAACAATGTCATTTACTTGATGATGAGTAAACACAAGTTCATTGAGGATTATAAAACTTATGTATATATTAATTATATTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E274229] | SGN-U579881 | Tomato 200607 | Build 2 | 40 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T90464 [Download][View] | Facility Assigned ID: TRRCE19TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0050 | Quality Trim Threshold: 14.5 |
Working
