EST details — SGN-E274544

Search information 
Request: 274544Match: SGN-E274544
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C65757Clone name: cLEN-11-F16
cartOrder Clone
Library Name: cLENOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: red ripe to over-ripe

Microarray: Alias clone SGN-C180825 is on microarray TOM1: SGN-S1-1-2.2.17.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C180825 [TUS-35-F23] Trace: SGN-T197702 EST: SGN-E396376 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E274544Length: 550 bp (912 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E274544 [] (trimmed) CAGGTTTCTCTAAAATCAGCTGAATCTTCGACAAATGGTTACATCTCTTTAAGTGAGTCAATCTCAAGAGCATGTTTTCTGGCTCTTCTCTCTGC
TTCACTCTTCTCTGCTTCACATCCTGCTTTAGCCTTTAAAGGCGGAGGCCCTTACCGTGCTGGAGTAACATGAGGCCAAGATCTAACAGGGACGG
ATTTTAGTGGTAAAAGTTTAATCACACAAGATTTTAAAACTTCAATACTCAGACAAGCTAACTTTAAAGGTGCGAAGTTACTCGGAGCTAGCTTC
TTTGATGCCGATTTAACTGGTGCTGATCTATCCGATGCGGATCTTAGAGGTGCTGATTTCTCCTTAGCTGATGTGACTAACGTCAATTTAAGCAA
TGCTAATTTGGAAGGAGCACTTACAACGGGGAATACATCTTTCAAGGGTTCCGTTATACAAGGCGCAGATTTCACCGATGTTCCTTTAAGAGAAG
ATCAACGAGAGTACCTTTGTAAATCTGCTGATGGTTTGAATACAGTTACTGGGAATGCAACACGAGAGACATTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E274544] SGN-U566594 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T89571 [Download][View] Facility Assigned ID: TRRBR32TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0263 Quality Trim Threshold: 12.5