EST details — SGN-E274801
| Search information |
| Request: 274801 | Match: SGN-E274801 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C66353 | Clone name: cLEN-13-O12 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C180949 is on microarray TOM1: SGN-S1-1-6.4.17.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180949 [TUS-35-L3] | Trace: SGN-T197719 | EST: SGN-E396393 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E274801 | Length: 681 bp (974 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E274801 [] (trimmed)
ATTAGCTCATAATTTACTTATTATTACTGTTTAATAGCCATTTTTAAACATCTTCTTTTTCAGAATTGCATTTGCATGGCCACTAATTTACAGAA
ACGTGGACTGGTAAGCTTGGGGAAACGATTTGTGAACCAGATAACTTATTCAACTTCTCGAAATTCTGCCAACTCATCATCTACTGCGCTCTCTG
GCAGGAATGTGGTGCACACGTCAGTGTATGACAAGAATATAGAGGAATATGTGTCATCGTGGGTACCTGATGAAATAATCGAGGTAGAATCGGAC
AAATACAAGTACTGGACTCCTCATCCCCAAACAGGGGTGTTTGGGCCAGCTACTGATCACATTATAAAATATGGTTCTCAATTCTCCACGGTAGA
TTCTGTGTTGGAACAAAAGACATTTTTTCGTGATTTCGAGGATCTGGAGAAGCCTAGTTATCCTTAAGTTTCAGAAAACATCACAACAGAAAATA
CTACTAGCAGGGAAGGTGAAAGAGGTGTTTCGTTTGTTGTGTTCTATGAATATGTGATATGTTTAGTTAATTAATGGAAGTATAATATGGAGTAT
GTATAGAATAAAACTAGCTACTCTGTGTGGGCTGCTTTTAAATGGTCATATGGTGCAATACATACGATCAAACTTCTCTGTAATATCGTTTGTTT
GTCCAAATTAAAAAAA
ACGTGGACTGGTAAGCTTGGGGAAACGATTTGTGAACCAGATAACTTATTCAACTTCTCGAAATTCTGCCAACTCATCATCTACTGCGCTCTCTG
GCAGGAATGTGGTGCACACGTCAGTGTATGACAAGAATATAGAGGAATATGTGTCATCGTGGGTACCTGATGAAATAATCGAGGTAGAATCGGAC
AAATACAAGTACTGGACTCCTCATCCCCAAACAGGGGTGTTTGGGCCAGCTACTGATCACATTATAAAATATGGTTCTCAATTCTCCACGGTAGA
TTCTGTGTTGGAACAAAAGACATTTTTTCGTGATTTCGAGGATCTGGAGAAGCCTAGTTATCCTTAAGTTTCAGAAAACATCACAACAGAAAATA
CTACTAGCAGGGAAGGTGAAAGAGGTGTTTCGTTTGTTGTGTTCTATGAATATGTGATATGTTTAGTTAATTAATGGAAGTATAATATGGAGTAT
GTATAGAATAAAACTAGCTACTCTGTGTGGGCTGCTTTTAAATGGTCATATGGTGCAATACATACGATCAAACTTCTCTGTAATATCGTTTGTTT
GTCCAAATTAAAAAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E274801] | SGN-U579081 | Tomato 200607 | Build 2 | 58 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T90104 [Download][View] | Facility Assigned ID: TRRBX90TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0084 | Quality Trim Threshold: 12.5 |
Working
