EST details — SGN-E274963
| Search information |
| Request: 274963 | Match: SGN-E274963 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C66801 | Clone name: cLEN-16-A19 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C183615 is on microarray TOM1: SGN-S1-1-4.3.2.21
See unigene SGN-U578195 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C183615 [TUS-42-K5] | Trace: SGN-T195494 | EST: SGN-E394168 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183615 [TUS-42-K5] | Trace: SGN-T195494 | EST: SGN-E399174 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183615 [TUS-42-K5] | Trace: SGN-T199407 | EST: SGN-E398081 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183615 [TUS-42-K5] | Trace: SGN-T200250 | EST: SGN-E399173 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E274963 | Length: 595 bp (880 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E274963 [] (trimmed)
ATGGCCACTCAGTGTTATGACCCCGAAAACTCCGCCTCTCGTTACACATTACTCCCGGATCAACCCGATTCCGGCCACCGGAAGTCCCTTAAAAT
CATCTCCGGCATTTTCCTCTCCGTTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAACAACCAGTCACCGGACTTGCAAATCGACTCCC
GTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTCTCCGATAAAACTTTTCGAGATGTAGCCGGTGCTAGTCACGTTTCTTATGCGTGG
TCCAATGCTATGCTTAGCTGGCAAAGAACGGCTTACCATTTTCAACCTCAAAAAAATTGGATGAACGATCCTAATGGACCATTGTATCACAAGGG
ATGGTACCACCTTTTTTATCAATACAATCCAGATTCAGCTATTTGGGGAAATATCACATGGGGCCATGCTGTATCCAAGGACTTGATCCACTGGC
TCTACTTGCCTTTTGCCATGGTTCCTGATCAATGGTATGATATTAACGGTGTCTGGACAGGGTCCGCTACCATCCTACCCGATGGTCAGATCATG
ATGCTTTATACCGGTGACACTGATG
CATCTCCGGCATTTTCCTCTCCGTTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAACAACCAGTCACCGGACTTGCAAATCGACTCCC
GTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTCTCCGATAAAACTTTTCGAGATGTAGCCGGTGCTAGTCACGTTTCTTATGCGTGG
TCCAATGCTATGCTTAGCTGGCAAAGAACGGCTTACCATTTTCAACCTCAAAAAAATTGGATGAACGATCCTAATGGACCATTGTATCACAAGGG
ATGGTACCACCTTTTTTATCAATACAATCCAGATTCAGCTATTTGGGGAAATATCACATGGGGCCATGCTGTATCCAAGGACTTGATCCACTGGC
TCTACTTGCCTTTTGCCATGGTTCCTGATCAATGGTATGATATTAACGGTGTCTGGACAGGGTCCGCTACCATCCTACCCGATGGTCAGATCATG
ATGCTTTATACCGGTGACACTGATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E274963] | SGN-U578195 | Tomato 200607 | Build 2 | 342 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T90686 [Download][View] | Facility Assigned ID: TRRCI10TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.984 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 14.5 |
Working
