EST details — SGN-E274988
| Search information |
| Request: 274988 | Match: SGN-E274988 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C66820 | Clone name: cLEN-16-C2 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C181045 is on microarray TOM1: SGN-S1-1-6.4.17.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C181045 [TUS-35-P3] | Trace: SGN-T196424 | EST: SGN-E395098 | Direction: 3' | Facility: INRA |
| Clone: SGN-C181045 [TUS-35-P3] | Trace: SGN-T196425 | EST: SGN-E395099 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E274988 | Length: 513 bp (918 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E274988 [] (trimmed)
CTCTATTGTCGGAAATTGTAGCCTTGAGATTCATGTTCAAGCAACCTATTGTTGCTAATAGTAGCAGTGATCAAACTCTATGAATGTCCTACTGT
TCAACATGTTGTGTTTCGGATCAAGTTTTTGTTTTTTTTTGTGTATGATGTCAGCCGAAATGATTTTCCAGTAGCTCATTTATGCATAAGGAAAA
ATTTAGTCTACAAAATACATCTCCGATCCATGTGATGTTTCTTCCCTTTCTCCTTGCAAATTGTATTCAAATCATCCTCATGTTTGTCACATATA
GGAGTATTAATTTCTCTGCTTCCCTTTTTCCTTTATTGTTGGTGATTTCTCTTACAAGAATGATAAATGAGTATCATTATCCCTTTAAATTTTTG
TTTAAGTAATATTCTATGTTGTGTTATTAGTTTCTTCATTTAAATGGATTGATTTGGAGTTAATAAACGGGGGGATGTTGAGTTAAAGATTTGGC
AAAGGTTCAAGTTTGGTCATTTCATTTTTAGAATTATT
TCAACATGTTGTGTTTCGGATCAAGTTTTTGTTTTTTTTTGTGTATGATGTCAGCCGAAATGATTTTCCAGTAGCTCATTTATGCATAAGGAAAA
ATTTAGTCTACAAAATACATCTCCGATCCATGTGATGTTTCTTCCCTTTCTCCTTGCAAATTGTATTCAAATCATCCTCATGTTTGTCACATATA
GGAGTATTAATTTCTCTGCTTCCCTTTTTCCTTTATTGTTGGTGATTTCTCTTACAAGAATGATAAATGAGTATCATTATCCCTTTAAATTTTTG
TTTAAGTAATATTCTATGTTGTGTTATTAGTTTCTTCATTTAAATGGATTGATTTGGAGTTAATAAACGGGGGGATGTTGAGTTAAAGATTTGGC
AAAGGTTCAAGTTTGGTCATTTCATTTTTAGAATTATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E274988] | SGN-U567740 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T90711 [Download][View] | Facility Assigned ID: TRRCJ13TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.923 | Expected Error Rate: 0.0087 | Quality Trim Threshold: 14.5 |
Working
