EST details — SGN-E275512
| Search information |
| Request: 275512 | Match: SGN-E275512 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C65446 | Clone name: cLEN-10-C24 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C180803 is on microarray TOM1: SGN-S1-1-8.2.17.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180803 [TUS-35-F1] | Trace: SGN-T196379 | EST: SGN-E395053 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180803 [TUS-35-F1] | Trace: SGN-T196380 | EST: SGN-E395054 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E275512 | Length: 608 bp (845 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E275512 [] (trimmed)
GGGAATTTGCAGCAGCTTTTGGGGTTATTTTGGTGTTCTCAACAGGATTGTTTTGCTTATACTTGTCAATGCCAGCTGCTGAGTATGGTAAATTG
AAGCTGCCTCGTACCATCTCCGATCTCCGGATTCTCAAGGATAATCTCGGAATGTATGCGAAAGTATACCCCACAAAATTTATTCTTGGTTACTG
CTCAACATACATATTCATGCAGACATTCATGATTCCTGGTACAATATTCATGTCTTTACTTGCTGGAGCACTTTTTGGCATTTTCAGAGGGCTTC
TCTTGGTTGTCTTTAATGCAACAGCTGGAGCATCGTCCTGCTATTTTCTGTCTAAATTGATCGGCAGGCCTATAGTTAACTGGATGTGGCCTGAA
AAGTTGAGATTTTTCCAGGCAGAGGTCTGTAGTCTTCTTAAAGTGATTGCTAGTGATGTACTGCCTCTTTTATCTACTATATTCATCGTAGCTTT
CTTTCTGGTGCACACTGCACACTAATGTGAAATGTTTTGGTTTTAGATAGCCAAACGTCGGGATAAGTTGCTCAACTACATGCTGTTTTTGAGAA
TAACTCCAACATTACCAAATCTTTTCATCAATTTGGCA
AAGCTGCCTCGTACCATCTCCGATCTCCGGATTCTCAAGGATAATCTCGGAATGTATGCGAAAGTATACCCCACAAAATTTATTCTTGGTTACTG
CTCAACATACATATTCATGCAGACATTCATGATTCCTGGTACAATATTCATGTCTTTACTTGCTGGAGCACTTTTTGGCATTTTCAGAGGGCTTC
TCTTGGTTGTCTTTAATGCAACAGCTGGAGCATCGTCCTGCTATTTTCTGTCTAAATTGATCGGCAGGCCTATAGTTAACTGGATGTGGCCTGAA
AAGTTGAGATTTTTCCAGGCAGAGGTCTGTAGTCTTCTTAAAGTGATTGCTAGTGATGTACTGCCTCTTTTATCTACTATATTCATCGTAGCTTT
CTTTCTGGTGCACACTGCACACTAATGTGAAATGTTTTGGTTTTAGATAGCCAAACGTCGGGATAAGTTGCTCAACTACATGCTGTTTTTGAGAA
TAACTCCAACATTACCAAATCTTTTCATCAATTTGGCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E275512] | SGN-U568060 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T89384 [Download][View] | Facility Assigned ID: TRRBL24TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0021 | Quality Trim Threshold: 14.5 |
Working
