EST details — SGN-E275904

Search information 
Request: 275904Match: SGN-E275904
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C66148Clone name: cLEN-12-O3
cartOrder Clone
Library Name: cLENOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: red ripe to over-ripe

Microarray: Alias clone SGN-C180905 is on microarray TOM1: SGN-S1-1-2.2.17.12
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C180905 [TUS-35-J7] Trace: SGN-T196403 EST: SGN-E395077 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E275904Length: 522 bp (895 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E275904 [] (trimmed) GGACAACAGTATACAGAGGGTCCTAGAATCGAGAAATATAAAGAAATGCTTAAGAGGAAGGCAGGAGATCAAGGTGCTGAATTCGTGTCATATGA
TTCCGTCAAAGGAGAATGGAAGTTCAAGGTGCAGCATTTCAGCAAATATTGGCTTCATGAAGACAACGAAGATGAATATAGCGAATATTTTGATG
CCTAGCTGCAGCCGGCAAGAAGAAAGACTAGCTTAATTTCTGGTATACAGCTACTTCATGTAAAGAACCCACTAGCTCATTTGTGGAATATGGGT
TGTGTAGTTCCCCCCTTTTTTTTTTCAGTTTTTGTTGTGGATCTCGTTTTTTTCCCCGTTGTATTTGTTTGCTTTTTCTGGTCTTTTTATGTCAT
TATATCTGTTGTTTCAAGAAGTGCAGTTTTTTTCATTCGGAGATTTTGAATTGAGGAATCTACGCTCATCTTTTTATATGCTTAATTTAGGACAA
AATGGTTCACCTGGAATATAAATTGAGAATCTTTCTTTTAACCAGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E275904] SGN-U570743 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T89728 [Download][View] Facility Assigned ID: TRRBS86TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0012 Quality Trim Threshold: 12.5