EST details — SGN-E276021
| Search information |
| Request: 276021 | Match: SGN-E276021 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C66036 | Clone name: cLEN-12-I11 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C180873 is on microarray TOM1: SGN-S1-1-2.4.17.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180873 [TUS-35-H23] | Trace: SGN-T197710 | EST: SGN-E396384 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180873 [TUS-35-H23] | Trace: SGN-T199716 | EST: SGN-E398390 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E276021 | Length: 660 bp (886 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E276021 [] (trimmed)
GCCATATCATCATCGTTCTCCGCCACCTAACCGAAATGGACAGCTTAAATGCTGCTGGAGTAACGGAAAATTCCATCATCGGCTCCGATGAAGGG
GGCGGCTCCCCCACCCATGAAACTGACATTGACATGGGTGATGTTAAAGCTGAGCCTGTTGAGTATCCATCGCCTCCTGCGTCCCGTTTTCGAGA
AGGTGAAAAAGTTCTTGCCTTTCATAGCCAACAACTCTATGAAGCTAAGGTTCAAAAAGCTGTGTATCAAATGAGGGAGTGGAGATATTTTGTTC
ATTATCTGGGTTGGAACAAAAGCTGGGATGAATGGGCGGGCATAGATCGATTAATGAAACACACAGAAGAGAATGTTCAGAAGCAGCAGGAGCTT
AAGAAAAAACAGGATACAGATAAAAATGAGAAGGCTGCACGTGGATCACAAATGAAAACTAAAGGTTCTACAGGGAAAAGAGGCAGAAAGCGAAA
GAGTGATGTTCCACCGAAGGACAAGGATGGTCCTCCTCCAGAAAAGCTTGTCAATATCCAAATACCGCCACAATTGAAGAAACAGCTGGTTGATG
ATTGTGAATTTGTCAACCACTTGGGCAAGCTTGTCAGACTTCCTCGTTCTCCAAATGTGGAAGACATACTACAGAAATATCATGACTATC
GGCGGCTCCCCCACCCATGAAACTGACATTGACATGGGTGATGTTAAAGCTGAGCCTGTTGAGTATCCATCGCCTCCTGCGTCCCGTTTTCGAGA
AGGTGAAAAAGTTCTTGCCTTTCATAGCCAACAACTCTATGAAGCTAAGGTTCAAAAAGCTGTGTATCAAATGAGGGAGTGGAGATATTTTGTTC
ATTATCTGGGTTGGAACAAAAGCTGGGATGAATGGGCGGGCATAGATCGATTAATGAAACACACAGAAGAGAATGTTCAGAAGCAGCAGGAGCTT
AAGAAAAAACAGGATACAGATAAAAATGAGAAGGCTGCACGTGGATCACAAATGAAAACTAAAGGTTCTACAGGGAAAAGAGGCAGAAAGCGAAA
GAGTGATGTTCCACCGAAGGACAAGGATGGTCCTCCTCCAGAAAAGCTTGTCAATATCCAAATACCGCCACAATTGAAGAAACAGCTGGTTGATG
ATTGTGAATTTGTCAACCACTTGGGCAAGCTTGTCAGACTTCCTCGTTCTCCAAATGTGGAAGACATACTACAGAAATATCATGACTATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E276021] | SGN-U567659 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T89845 [Download][View] | Facility Assigned ID: TRRBS54TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0103 | Quality Trim Threshold: 14.5 |
Working
