EST details — SGN-E276028
| Search information |
| Request: 276028 | Match: SGN-E276028 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C66073 | Clone name: cLEN-12-K17 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C180899 is on microarray TOM1: SGN-S1-1-8.2.17.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180899 [TUS-35-J1] | Trace: SGN-T196402 | EST: SGN-E395076 | Direction: 5' | Facility: INRA |
| Clone: SGN-C180899 [TUS-35-J1] | Trace: SGN-T197711 | EST: SGN-E396385 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E276028 | Length: 615 bp (889 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E276028 [] (trimmed)
AAATAGCGAGCAACTACTGGATGGCATGGTCATGTCCCACAGGTGATACATCACCAATAACAGGGAAGATGAACTCCATACTTTTTGTTTATGTG
CTTCTCGCTGTAGGAAGTTCTCTTTGTGTGCTAGTCCGGTCATCAGTTTTGGCTATAGTAGGCCTTCAAACCGCAGAAAAGCTCTTTAGCAACAT
GCTGCACAGCATCCTTCGTGCTCCTTTGTCATTCTTCGACTCTACTCCTACTGGAAGAATCTTAAATCGCGCATCGATAGACCAAAGTGTTCTAG
ACTTGAAAATGGCAAACAAGTTGGGTTTGTGTGCCTTCTCCATTATTCAGCTTCTTGGGACAATTGCAGTCATGTCGCATGCCGCATGGGAAGTA
TTTGTCATCTTTATTCCAGTAACAGCAGTCTGCATTTGGTACCAGCAATACTACATACCAACCGCAAGGGAGCTTGCTCGATTATATGGAGTTCA
AAGAGCTCCGATCCTCCATCACTTTGCAGAATCACTCGCAGGAGCAACAACAATTCGTGCTTTCAACCAAAAAGATCGATTTGCACATGCAAACC
TTTGTCTCATAGATGGTCATTCAAGGCCATGGTTTCACAATGTAT
CTTCTCGCTGTAGGAAGTTCTCTTTGTGTGCTAGTCCGGTCATCAGTTTTGGCTATAGTAGGCCTTCAAACCGCAGAAAAGCTCTTTAGCAACAT
GCTGCACAGCATCCTTCGTGCTCCTTTGTCATTCTTCGACTCTACTCCTACTGGAAGAATCTTAAATCGCGCATCGATAGACCAAAGTGTTCTAG
ACTTGAAAATGGCAAACAAGTTGGGTTTGTGTGCCTTCTCCATTATTCAGCTTCTTGGGACAATTGCAGTCATGTCGCATGCCGCATGGGAAGTA
TTTGTCATCTTTATTCCAGTAACAGCAGTCTGCATTTGGTACCAGCAATACTACATACCAACCGCAAGGGAGCTTGCTCGATTATATGGAGTTCA
AAGAGCTCCGATCCTCCATCACTTTGCAGAATCACTCGCAGGAGCAACAACAATTCGTGCTTTCAACCAAAAAGATCGATTTGCACATGCAAACC
TTTGTCTCATAGATGGTCATTCAAGGCCATGGTTTCACAATGTAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E276028] | SGN-U576896 | Tomato 200607 | Build 2 | 21 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T89852 [Download][View] | Facility Assigned ID: TRRBS69TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0023 | Quality Trim Threshold: 14.5 |
Working
