EST details — SGN-E276348
| Search information |
| Request: 276348 | Match: SGN-E276348 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C67886 | Clone name: cLEN-21-P12 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C183187 is on microarray TOM1: SGN-S1-1-8.1.3.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183187 [TUS-41-I9] | Trace: SGN-T191496 | EST: SGN-E390170 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183187 [TUS-41-I9] | Trace: SGN-T191706 | EST: SGN-E390380 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E276348 | Length: 427 bp (929 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E276348 [] (trimmed)
GAAAAGGCAAAACATTCACAATGTAATTCAACAATACCCTAAATCTATTTAGGTCCAAACAGAAACAATAAGTTTGAGCTAACTCATGTATTCAT
AAAATTGAATGAACTCATCTCTCTCTTAACAAGCAACAGCAATTCTTCCGGCAACTTGGTCAAGATCCCGCTGACCACTGGATGTGATCCTCCTT
CCGCCCTTAGGCTCAAAGTCAATGATGTTCATGTTCTGCAACTGTTGAAGAATGTGGCGTGCAACTGAACCACTGCTCCCTTTCTTTAACCGTCA
CCAGCTGACAATGACCCAATTTATCCAGTTAAAGCAAGTAGAAGAGGGTGCTGGTAAGGCTCCACCACCTGTGTTAGTCCTCCATGGCCATTACG
GTGGATGTGTTGGAGATCTTCCCAGCTATGATGCTTTCACACTTGGG
AAAATTGAATGAACTCATCTCTCTCTTAACAAGCAACAGCAATTCTTCCGGCAACTTGGTCAAGATCCCGCTGACCACTGGATGTGATCCTCCTT
CCGCCCTTAGGCTCAAAGTCAATGATGTTCATGTTCTGCAACTGTTGAAGAATGTGGCGTGCAACTGAACCACTGCTCCCTTTCTTTAACCGTCA
CCAGCTGACAATGACCCAATTTATCCAGTTAAAGCAAGTAGAAGAGGGTGCTGGTAAGGCTCCACCACCTGTGTTAGTCCTCCATGGCCATTACG
GTGGATGTGTTGGAGATCTTCCCAGCTATGATGCTTTCACACTTGGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E276348] | SGN-U570977 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91607 [Download][View] | Facility Assigned ID: TRRDF90TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0206 | Quality Trim Threshold: 14.5 |
Working
