EST details — SGN-E276594
| Search information |
| Request: 276594 | Match: SGN-E276594 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C67001 | Clone name: cLEN-17-B24 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C181051 is on microarray TOM1: SGN-S1-1-8.4.17.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C181051 [TUS-35-P9] | Trace: SGN-T196427 | EST: SGN-E395101 | Direction: 5' | Facility: INRA |
| Clone: SGN-C181051 [TUS-35-P9] | Trace: SGN-T197736 | EST: SGN-E396410 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E276594 | Length: 619 bp (901 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E276594 [] (trimmed)
TTTCTTAAGTGTTTGGTTGTGTCTGTTTTGTTCATGTTCCTCATGTTAGACGTGACAAACTTGACAAGAAGGCAATCGGCAATCATAGGCATCCA
TGTGGCTTACAGTGAAGTTTCTAAAGCCTACAAGGTCTATCATCCTCAGACAAAGAAGATGACAATTACAAGAGATGTTCATTTTAGTGAGAATG
AATAGTGGGACTGGAAGAACTCTCATAAATCAGGAAGTCGCTCTCTAGAAGCAAACATCAGTCCTCCTGAAGAGCAAAAAACAGAACACTGGCAG
CAAGAACTAGAAGATGATCATCCAGTCAAGGGGAGGAGGTTGTTGTCAGATATCTATCAGAGGTGTAATGTCGCCATCTATGAACCTGCTGGTCC
CGTAGAAGCTTTGCAAGACCCAAAATGGAAGAAAGCAATGGAGGAGGAGATCTCCATGATTGAGAAAAATAAAACTTGGGTGCTGGTAAACAAAC
CTGAAGATAGAAAAGTCATTGGTGTGAGATGGGTCTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAATACAAAGCGAGGCTTGTAGTT
AAAGGGTATGCACAAATTTATGGTATTGATTACTCTGACACTCCTGTTG
TGTGGCTTACAGTGAAGTTTCTAAAGCCTACAAGGTCTATCATCCTCAGACAAAGAAGATGACAATTACAAGAGATGTTCATTTTAGTGAGAATG
AATAGTGGGACTGGAAGAACTCTCATAAATCAGGAAGTCGCTCTCTAGAAGCAAACATCAGTCCTCCTGAAGAGCAAAAAACAGAACACTGGCAG
CAAGAACTAGAAGATGATCATCCAGTCAAGGGGAGGAGGTTGTTGTCAGATATCTATCAGAGGTGTAATGTCGCCATCTATGAACCTGCTGGTCC
CGTAGAAGCTTTGCAAGACCCAAAATGGAAGAAAGCAATGGAGGAGGAGATCTCCATGATTGAGAAAAATAAAACTTGGGTGCTGGTAAACAAAC
CTGAAGATAGAAAAGTCATTGGTGTGAGATGGGTCTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAATACAAAGCGAGGCTTGTAGTT
AAAGGGTATGCACAAATTTATGGTATTGATTACTCTGACACTCCTGTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E276594] | SGN-U576392 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91015 [Download][View] | Facility Assigned ID: TRRCP12TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.947 | Expected Error Rate: 0.0072 | Quality Trim Threshold: 14.5 |
Working
