EST details — SGN-E277441

Search information 
Request: 277441Match: SGN-E277441
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C73222Clone name: cLER-3-N1
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C185312 is on microarray TOM1: SGN-S1-1-3.1.9.6
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185312 [TUS-47-A22] Trace: SGN-T192165 EST: SGN-E390839 Direction: 3' Facility: INRA
Clone: SGN-C185312 [TUS-47-A22] Trace: SGN-T197600 EST: SGN-E396274 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E277441Length: 490 bp (767 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E277441 [] (trimmed) CATCATTGATTTAAGCAAAAACAGAAACTTCAACAAAATTAAATGTCACTAATGAACTGAAACGGACTGATATAAATTCTCTTTAGCTAAAATAG
CAATACCAGACAAAATGAGTGAAAAATCAATCGATTTTCTGCATGATATCCTCAGAAGTGAACTTAGTGCCCTTGTCCTTGTCAGCAGCAGCTCG
TCCCTTAGCCTTGCGGTCGAGTAGTGATCTCCTGTCTTTGTCAAGCCTTAGCTTTGTAACAACAACCTTCGAAGGATGAATACCAACGTTCACAG
TAGATCCATTGACCTTCTCTCTGGTTATACGTTCAATGTGGATCACCCATTTCTTACGGTACACTTGGACAACTTTCCCGTCACGGCCCTTGTAA
GTTCCACGAACAACCTGAACTTCGTCATCTTTCCTCACCGGCATAGATCTTACGTTGTACTTTACACGTAACTCGGACGATAAGGGTGCGCTCAT
TAAAATCCGGCGCGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E277441] SGN-U579485 Tomato 200607 Build 2 53 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T92329 [Download][View] Facility Assigned ID: TPRAK73THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0043 Quality Trim Threshold: 14.5