EST details — SGN-E277977

Search information 
Request: 277977Match: SGN-E277977
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C73412Clone name: cLER-4-K4
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C185939 is on microarray TOM1: SGN-S1-1-8.4.7.6
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185939 [TUS-48-L1] Trace: SGN-T192802 EST: SGN-E391476 Direction: 3' Facility: INRA
Clone: SGN-C185939 [TUS-48-L1] Trace: SGN-T197759 EST: SGN-E396433 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E277977Length: 406 bp (767 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E277977 [] (trimmed) TCAAAGTGCATCGGTCCTGGGATGAATTCAGGGAGTACTTCATGGGACAGGCTGGGGAAAAGAGGCTGTTGGCATTTACAAAGAGAGGAATAGCT
ACACATTCCGACTTCTCCTACAAAAAGGGCGATTGGCTTGTATTTGGGTCAGAAACTAAAGGGTTACCTCCTGAAGCCCTTCTTGATTGCAAGAG
TGAATCTCTTGGAGGAGGAACCCTACGGATTCCCATGGTTGAAACATATGTTAGGTGCTTGAATTTATCAGAAAGTGTTGGTATTGCTGTATATG
AAGCTTCTCGACAAATAAACTATGAACAACTTCAGTGTCCACCTGATACTTGTATGGATACCGAAACATCATTTGTTACTGAAGATATTTTTGCT
TAAACTTATTCATATTGCACTTCTAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E277977] SGN-U574309 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T92810 [Download][View] Facility Assigned ID: TPRAN62TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0089 Quality Trim Threshold: 12.5