EST details — SGN-E279755

Search information 
Request: 279755Match: SGN-E279755
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C74181Clone name: cLER-8-C11
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C184369 is on microarray TOM1: SGN-S1-1-2.2.16.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184369 [TUS-44-J15] Trace: SGN-T198301 EST: SGN-E396975 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E279755Length: 489 bp (871 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E279755 [] (trimmed) TAAACACTACTACTAAAAACCCTCCAAAAAAAAAATGATGATGATCGGCCGATCACCTCCCACCGTCCAAATCCCTCCTTGGGACGTCACCGATG
ATCCAACGGTTGATGTTTATTCCCCATTCTCCGTTAGCCCTGATTCTGCTTTCGATGTTTTGACGGCGTTGCAGCGTTACCTGCCATCAAATGGT
AACGATGTGATTTTTGACTCTGATGGGTTGGATATTCCGGTGGATGCATTTTCATGTGATAATTTCAGGATGTATGAGTTTAAGGTGAGGAAGTG
TGCACGTGGAAGGTCACATGACTGGACGGAGTGTCCGTACGCTCATCCCGGTGAGAAAGCTCGCCGGAGGGATCCAAGAAAGTATCATTACTCAG
GTACTTCTTGTCCTGATTTTCGTAAAGGTCAGTGTAAAAAAGGTGATGCATGTGAGTACGCTCACGGCGTATTTGAGTGTTGGCTACACCCTGCT
CGCTATCGTACGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E279755] SGN-U563065 Tomato 200607 Build 2 25 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T93657 [Download][View] Facility Assigned ID: TPRBC18TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.986 Expected Error Rate: 0.0040 Quality Trim Threshold: 14.5