EST details — SGN-C27994
| Search information |
| Request: 27994 | Match: SGN-C27994 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C27994 | Clone name: cLEF-46-D8 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176843 is on microarray TOM1: SGN-S1-1-8.1.8.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176843 [TUS-25-A1] | Trace: SGN-T1429 | EST: SGN-E378268 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C176843 [TUS-25-A1] | Trace: SGN-T181631 | EST: SGN-E369769 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247247 | Length: 534 bp (932 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E247247 [] (trimmed)
GTTGAAAAGCACAAGAAGGGAGAATATACCTCCATTATCCATGGTAAATATGCTCATGAGGAAACTGTTGCGACTGCATCCTTTGCTGGGAAATA
CATCATTGTGAAGAACATGGCAGAGGCAACTTATGTCTGTGATTATATTCTTGGAGGTAAACTTGATGGTTCTAGCTCAACCAAAGAGGCATTTA
TGCAGAAATTTAAATATGCAGTTTCTGAAGGGTTTGATCCGGATGTTGACCTTGTAAAAGCTGGTATTGCAAACCAAACAACTATGTTGAAGGGA
GAAACAGAAGATATTGGGAAGTTGGTCGAGAGGACCATGATGCAAAAATATGGGGTGGAAAATGTTAACAACCACTTCGTAAGTTTCAACACTAT
ATGCGATGCCACACAAGAGCGTCAAGATGCAATGTATAAGCTGGTTGAGCAAAAGCTGGATCTTATGTTAGTGATTGGTGGCTGGAACTCAAGTA
ACACTTCACATCTACAGGAGATTGCAGAGGAACGTGGAATTCCCTCATACTGGATTGAC
CATCATTGTGAAGAACATGGCAGAGGCAACTTATGTCTGTGATTATATTCTTGGAGGTAAACTTGATGGTTCTAGCTCAACCAAAGAGGCATTTA
TGCAGAAATTTAAATATGCAGTTTCTGAAGGGTTTGATCCGGATGTTGACCTTGTAAAAGCTGGTATTGCAAACCAAACAACTATGTTGAAGGGA
GAAACAGAAGATATTGGGAAGTTGGTCGAGAGGACCATGATGCAAAAATATGGGGTGGAAAATGTTAACAACCACTTCGTAAGTTTCAACACTAT
ATGCGATGCCACACAAGAGCGTCAAGATGCAATGTATAAGCTGGTTGAGCAAAAGCTGGATCTTATGTTAGTGATTGGTGGCTGGAACTCAAGTA
ACACTTCACATCTACAGGAGATTGCAGAGGAACGTGGAATTCCCTCATACTGGATTGAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247247] | SGN-U580658 | Tomato 200607 | Build 2 | 115 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T61658 [Download][View] | Facility Assigned ID: TMGHB16TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0039 | Quality Trim Threshold: 14.5 |
Working
