EST details — SGN-C28002

Search information 
Request: 28002Match: SGN-C28002
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C28002Clone name: cLEF-46-E15
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176846 is on microarray TOM1: SGN-S1-1-5.1.8.1
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176846 [TUS-25-A4] Trace: SGN-T181714 EST: SGN-E369222 Direction: 3' Facility: INRA
Clone: SGN-C176846 [TUS-25-A4] Trace: SGN-T181715 EST: SGN-E369223 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E247115Length: 314 bp (425 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E247115 [] (trimmed) GGATCCTTCTGCACCATCCACCATTTTTGTTTGAATACCCCCAAACGAATCGAACCACAGTTATTTCAATTTCTTTGATATTCAAAATTATAAAG
CTTACTTCCCCAGATTAGTATGAGATATGGGCAATTCTATGAAGCAAGAATCTCCTCTTCTTAGTTATCTTCTCTTTGTGTTTCTCTTCACATGT
TCTTCTTTAATTGACGAATCAGTCGCACAGCCACCAACTACTGGAAATAAATTTCAATATGCAAGGCTCAGTCATCCTTTGGCAATTATCATAAT
TGTTCTTATTGCTGCGCTCTTTTTCATGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247115] SGN-U572830 Tomato 200607 Build 2 31 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T61526 [Download][View] Facility Assigned ID: TMGGY32TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.941 Expected Error Rate: 0.0015 Quality Trim Threshold: 14.5