EST details — SGN-E280261
| Search information |
| Request: 280261 | Match: SGN-E280261 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C72058 | Clone name: cLER-1-A21 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178431 is on microarray TOM1: SGN-S1-1-4.3.4.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C72058 [cLER-1-A21] | Trace: SGN-T91814 | EST: SGN-E280260 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C178431 [TUS-29-C5] | Trace: SGN-T183820 | EST: SGN-E370479 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280261 | Length: 532 bp (808 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E280261 [] (trimmed)
GGAAGGTAACAACATACTAAATCACACCAAGTATTACAATACATTTTTCACTTGCTTCGATAATTGAAAGTATTGTATTATTTTCTTTTACATGT
CCATTTGAGCTAGAGTGATGAGAAAATGGGGACACCTGGTAAGCTAGCTCCACCATCGACGATGAAAACATTACCCGTTACATACTCAGAAGAAT
CATGAATTAAGTATCGAATGAGAGACGTTAAACCTGGATCTGTCGTTCCAAGATATCTAGTAGGAAGAGTTTTATAAAGAAATTTGTGAAACCAT
TTCTGTTCAACTAGGCTCTCTGGTATCTCTGATTTGAAAACTCCTGGCGATATCGAGTTCAATCTGATATTCTCTCCGCCCAATTCAATCGCCAT
TATCTTAGTAACCATGTCTAGAGCCATCTTTGAAGTAGCGTAAGCAGTAGTTCCTGGCACTGCTATACGATTTAAACCCGCCATCGAAGTGATGT
TAATAACAGATCCTCCGCCCTGTTTAGCATCGATCATACGCTTACATACATATTTCG
CCATTTGAGCTAGAGTGATGAGAAAATGGGGACACCTGGTAAGCTAGCTCCACCATCGACGATGAAAACATTACCCGTTACATACTCAGAAGAAT
CATGAATTAAGTATCGAATGAGAGACGTTAAACCTGGATCTGTCGTTCCAAGATATCTAGTAGGAAGAGTTTTATAAAGAAATTTGTGAAACCAT
TTCTGTTCAACTAGGCTCTCTGGTATCTCTGATTTGAAAACTCCTGGCGATATCGAGTTCAATCTGATATTCTCTCCGCCCAATTCAATCGCCAT
TATCTTAGTAACCATGTCTAGAGCCATCTTTGAAGTAGCGTAAGCAGTAGTTCCTGGCACTGCTATACGATTTAAACCCGCCATCGAAGTGATGT
TAATAACAGATCCTCCGCCCTGTTTAGCATCGATCATACGCTTACATACATATTTCG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280261] | SGN-U580125 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91815 [Download][View] | Facility Assigned ID: TPRAA11TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0068 | Quality Trim Threshold: 14.5 |
Working
