EST details — SGN-E280324
| Search information |
| Request: 280324 | Match: SGN-E280324 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C72313 | Clone name: cLER-1-M7 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178642 is on microarray TOM1: SGN-S1-1-1.3.3.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C72313 [cLER-1-M7] | Trace: SGN-T91877 | EST: SGN-E280323 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C178642 [TUS-29-K24] | Trace: SGN-T183937 | EST: SGN-E371608 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178642 [TUS-29-K24] | Trace: SGN-T183938 | EST: SGN-E371609 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280324 | Length: 576 bp (839 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E280324 [] (trimmed)
TGATCAGTATATTGAAATTGTACAAAGTAGCAAACATCTGTAGGAACTAAAACAAGAAGAAAATTACATCAAACATAGCTTATTCGCAATGATAT
GTTCATTATTTCTAGCACAAAATGCAGAGACAGCACCGCCGAGTCCAGACTCTAGAGCTTAAGCAACACCCAAGAGTTTCTTGATATCCTTCTCC
ATGCTAGCTGGAGAAGTGGTTGGAGAGTAGCGATCAACGACATGTCCTTCTTTGTCAATGAGGAATTTGGAGAAGTTCCACTTGATACCATCTCC
AAAGAACCCACCTTTGCTTGATTTCAGAAACCTATATAATGGAGCAGCATTATCACCATTCACGTCAACCTTGTCAAATATGGGGTACTCAGCCT
TGAAGCGAGTGCAGACCATTTGCTGGATATCTTCAATGTTTCCAGGCTCCTGTCCACCAAACTGGTTGCAAGGGAAGGCCAGAATCTCCAAACCT
TGATCCTTGTACTTCTTGTATAACTCCGTCATGTCAGTGTAGTTCGAATTAGTCAGGCCACTGCATCAGAAAATGGAATCAGTTAACAGTCATAA
GCAAAT
GTTCATTATTTCTAGCACAAAATGCAGAGACAGCACCGCCGAGTCCAGACTCTAGAGCTTAAGCAACACCCAAGAGTTTCTTGATATCCTTCTCC
ATGCTAGCTGGAGAAGTGGTTGGAGAGTAGCGATCAACGACATGTCCTTCTTTGTCAATGAGGAATTTGGAGAAGTTCCACTTGATACCATCTCC
AAAGAACCCACCTTTGCTTGATTTCAGAAACCTATATAATGGAGCAGCATTATCACCATTCACGTCAACCTTGTCAAATATGGGGTACTCAGCCT
TGAAGCGAGTGCAGACCATTTGCTGGATATCTTCAATGTTTCCAGGCTCCTGTCCACCAAACTGGTTGCAAGGGAAGGCCAGAATCTCCAAACCT
TGATCCTTGTACTTCTTGTATAACTCCGTCATGTCAGTGTAGTTCGAATTAGTCAGGCCACTGCATCAGAAAATGGAATCAGTTAACAGTCATAA
GCAAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280324] | SGN-U578117 | Tomato 200607 | Build 2 | 53 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91878 [Download][View] | Facility Assigned ID: TPRAA76TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0078 | Quality Trim Threshold: 14.5 |
Working
