EST details — SGN-E280390

Search information 
Request: 280390Match: SGN-E280390
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C72118Clone name: cLER-1-D19
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178485 is on microarray TOM1: SGN-S1-1-6.1.4.18
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178485 [TUS-29-E11] Trace: SGN-T183828 EST: SGN-E370487 Direction: 3' Facility: INRA
Clone: SGN-C178485 [TUS-29-E11] Trace: SGN-T183829 EST: SGN-E370488 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E280390Length: 412 bp (728 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280390 [] (trimmed) GCAACCCTTTCCCTGTGTTCTACATCTTCCCCCTCAACAGCACTTTCCAAGAACCAAACTTTTCTTAACACCCTTTCTGTTCCCAAAGCAAATTC
CAATGTTACTTTTCTATCTCACTCATTTTCCTCTCTCAATCTCCGTTTCTCCAAGCCCAATTCTTTATCCTCTTTTGTACCCAAATACTCAGAAT
CTGAAGCTCCAGTAGCTGAAGTTGAAGCTGACCAAGAAGAGCCTGTTGTGGAAGCCACTAGCTTGGAACCAAAACGGGAAGAAATCTTTGCTGTT
GTTATGGTTGGATCTCGGCAATATATTGTTTTTCCTGGGCGGTATATCTACACCCAGAGGCTTAAAGGTGCAAATGTCAATGACAAAATTATCCT
AAACAAGGTGTTACTTGTGGGAACAAAAAACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280390] SGN-U563221 Tomato 200607 Build 2 37 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T91944 [Download][View] Facility Assigned ID: TPRAC22TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0129 Quality Trim Threshold: 14.5