EST details — SGN-E280400

Search information 
Request: 280400Match: SGN-E280400
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C72236Clone name: cLER-1-J13
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178582 is on microarray TOM1: SGN-S1-1-5.1.4.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178582 [TUS-29-I12] Trace: SGN-T183925 EST: SGN-E371596 Direction: 3' Facility: INRA
Clone: SGN-C178582 [TUS-29-I12] Trace: SGN-T183926 EST: SGN-E371597 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E280400Length: 363 bp (726 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280400 [] (trimmed) AATGATACTAAAATTCAATTGCTTGATCTTCCGGGAATCATTGAAGGTGCATCTGAAGGCAAGGGTCGTGGTAGGCAGGTCATTGCTGTTTCTAA
GTCAGCGGACATTGTATTAATGGTTCTCGATGCTTCAAAAAGTGAAGGCCATCGGCAAATATTGACAAAGGAGCTGGAAGCGGTGGGCCTGCGAC
TAAACAAGAAACCTCCTCAGATATACTTCAAGAAGAAAAAGACTGGTGGAATTTCTTTCAATAGCACTCTGCATCTGACACATGTGGATGAGAAG
CTATGCTATCAAATACTGCATGAATACAAGATCCACAATGCTGAGGTGTTATTTCGCGAAGATGCCACAGTGGATGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280400] SGN-U568775 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T91954 [Download][View] Facility Assigned ID: TPRAC55TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0063 Quality Trim Threshold: 14.5