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EST details — SGN-E280440

Search information 
Request: 280440Match: SGN-E280440
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C72242Clone name: cLER-1-J20
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178585 is on microarray TOM1: SGN-S1-1-2.1.4.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178585 [TUS-29-I15] Trace: SGN-T183846 EST: SGN-E370505 Direction: 3' Facility: INRA
Clone: SGN-C178585 [TUS-29-I15] Trace: SGN-T183847 EST: SGN-E370506 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E280440Length: 468 bp (814 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280440 [] (trimmed) CTCGAACCCCCCGCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGA
GCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGA
TCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGT
ATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGA
ATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280440] SGN-U578501 Tomato 200607 Build 2 26 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T91994 [Download][View] Facility Assigned ID: TPRAD58TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.986 Expected Error Rate: 0.0043 Quality Trim Threshold: 12.5