EST details — SGN-E280449
| Search information |
| Request: 280449 | Match: SGN-E280449 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C72326 | Clone name: cLER-1-N2 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178655 is on microarray TOM1: SGN-S1-1-4.4.4.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178655 [TUS-29-L13] | Trace: SGN-T184148 | EST: SGN-E371079 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178655 [TUS-29-L13] | Trace: SGN-T184149 | EST: SGN-E371080 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280449 | Length: 422 bp (805 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E280449 [] (trimmed)
CGATAAGAGAGAAGAGAGAATCCCTTTGCTGGTTTACGCTAACCTGAGATCAGAAAAAAAATACCCTTTTTCTACTCTGCATCTTCTCATCTAAA
CAGGGACCATGATTAAGTTGTTCAAAGTAAAAGAAAAGCAGAGAGAACAAGCTGAGAACGCAAATGGAAAGCCACCAGTCAAGAAACAAAGTCCT
GGAGAGTTGCGTCTTCATAAAGATATAAGTGAGCTAAATCTACCCAAAACATGTAGCATATCATTTCCCAATGGAAAAGATGACCTCATGAACTT
TGAAGTCACCATTCGGTCTGATGAAGGATATTATATGGGTGGCACATTTACGTTCTCTTTCAGTATTGCTACAATATATCCTCACGAGGCACCAA
AGGTTAAGTGCAAGACAAAGGTTTACCACCCAAATATCGACT
CAGGGACCATGATTAAGTTGTTCAAAGTAAAAGAAAAGCAGAGAGAACAAGCTGAGAACGCAAATGGAAAGCCACCAGTCAAGAAACAAAGTCCT
GGAGAGTTGCGTCTTCATAAAGATATAAGTGAGCTAAATCTACCCAAAACATGTAGCATATCATTTCCCAATGGAAAAGATGACCTCATGAACTT
TGAAGTCACCATTCGGTCTGATGAAGGATATTATATGGGTGGCACATTTACGTTCTCTTTCAGTATTGCTACAATATATCCTCACGAGGCACCAA
AGGTTAAGTGCAAGACAAAGGTTTACCACCCAAATATCGACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280449] | SGN-U578204 | Tomato 200607 | Build 2 | 154 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92003 [Download][View] | Facility Assigned ID: TPRAD73TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0180 | Quality Trim Threshold: 14.5 |
Working
