EST details — SGN-E280502
| Search information |
| Request: 280502 | Match: SGN-E280502 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C72216 | Clone name: cLER-1-I13 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178568 is on microarray TOM1: SGN-S1-1-3.4.3.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C72216 [cLER-1-I13] | Trace: SGN-T92055 | EST: SGN-E280501 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E280502 | Length: 616 bp (809 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E280502 [] (trimmed)
CTCCATTCCATCGCCGCTCCGCCGCCGTTCACCGCTTCAGAGTTCCTCATACGTAGCTGTGCTAGAAGTAATCTTCGCCTGAAAAACTGACCGAG
ATAGACGAATTTCTGGGTTCGCAGCTGGATTTAACCTAGAGTAACCGGAGCTAGTAGAAAGATGAGTATAGTACCGAAAGAGACAATAGAAGTGA
TATCACAAAGTATAGGTGTAAGCAATTTATCACCAGATGTCTTGCCTGCTCTGGCCGTCGATGTCGAATACCGTATTCGAGAGATTATGCAGGAA
GCTATTAAATGTATGCATCATTCGAAGAGAACTACGTTATCTACTGATGATGTGGATGCTGCACTTAGCTTGAGAGGTGTAGAGCCAATATATGG
CTTTGCTTCAGGAGATCCGTTAAGGTTCAGGAGAGCAGCTGGACATAAGGATTTGTTCTATATTGAAGAGAAGGATGTAGAATTCAAAGATGTGA
TCGAAGCTCCTTTGCCGAAAGCACCACTAGATGCTGCTGTTGTTGCCCATTGGTTAGCTATAGAAGGAGTACAACCTGCTATTCCTGAAAACCCT
CTGCCTGAAGTCTTAGCTATGCCGTCTGATAATAGAAATACCGAGT
ATAGACGAATTTCTGGGTTCGCAGCTGGATTTAACCTAGAGTAACCGGAGCTAGTAGAAAGATGAGTATAGTACCGAAAGAGACAATAGAAGTGA
TATCACAAAGTATAGGTGTAAGCAATTTATCACCAGATGTCTTGCCTGCTCTGGCCGTCGATGTCGAATACCGTATTCGAGAGATTATGCAGGAA
GCTATTAAATGTATGCATCATTCGAAGAGAACTACGTTATCTACTGATGATGTGGATGCTGCACTTAGCTTGAGAGGTGTAGAGCCAATATATGG
CTTTGCTTCAGGAGATCCGTTAAGGTTCAGGAGAGCAGCTGGACATAAGGATTTGTTCTATATTGAAGAGAAGGATGTAGAATTCAAAGATGTGA
TCGAAGCTCCTTTGCCGAAAGCACCACTAGATGCTGCTGTTGTTGCCCATTGGTTAGCTATAGAAGGAGTACAACCTGCTATTCCTGAAAACCCT
CTGCCTGAAGTCTTAGCTATGCCGTCTGATAATAGAAATACCGAGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280502] | SGN-U567340 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92056 [Download][View] | Facility Assigned ID: TPRAA55TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.980 | Expected Error Rate: 0.0076 | Quality Trim Threshold: 14.5 |
Working
